Gene EcSMS35_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0552 
Symbol 
ID6147328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp559774 
End bp560652 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content51% 
IMG OID641615446 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_001742653 
Protein GI170682413 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGG GATTTATTGG CTTAGGCATT ATGGGTACTC CGATGGCCAT TAATCTGGCG 
CGTGCCGGTC ATCAACTGCA TGTCACAACC ATTGGTCCGG TTGCTGATGA ATTACTGTCA
CTGGGTGCCG TCAGTGTTGA AACTGCGCGC CAGGTAACGG AAGCATCGGA CATCATTTTT
ATTATGGTGC CGGATACGCC ACAGGTTGAA GACGTTCTGT TTGGTGAAAA TGGTTGTACC
AAAGCCTCGC TGAAGGGCAA AACCATTGTT GATATGAGCT CCATTTCCCC GATCGAAACT
AAACGTTTCG CTCGTCAGGT GAATGAACTG GGCGGCGATT ATCTCGATGC GCCCGTCTCC
GGCGGTGAAA TCGGCGCGCG TGAAGGGACG TTGTCGATTA TGGTTGGCGG TGACGAAGCG
GTATTTGAAC GTGTTAAACC GCTGTTTGAA CTGCTCGGTA AAAATATCAC CCTCGTGGGC
GGTAACGGCG ACGGTCAAAC CTGCAAAGTG GCAAATCAGA TTATCGTGGC GCTCAATATT
GAAGCGGTTT CTGAAGCCCT GCTATTTGCT TCAAAAGCCG GAGCGGATCC GGTACGTGTG
CGCCAGGCGC TGATGGGCGG CTTTGCTTCC TCACGTATTC TGGAAGTTCA CGGTGAGCGC
ATGATTAAAC GCACCTTTAA TCCAGGTTTT AAAATTGCGC TGCACCAGAA AGATCTCAAC
CTGGCACTGC AAAGTGCGAA AGCACTGGCG CTGAATCTGC CAAACACCGC GACCTGCCAG
GAATTGTTTA ATACCTGTGC GGCAAACGGT GGTAGCCAGT TGGATCACTC TGCGTTAGTG
CAGGCGCTGG AATTAATGGC TAACCATAAA CTGGCCTGA
 
Protein sequence
MKLGFIGLGI MGTPMAINLA RAGHQLHVTT IGPVADELLS LGAVSVETAR QVTEASDIIF 
IMVPDTPQVE DVLFGENGCT KASLKGKTIV DMSSISPIET KRFARQVNEL GGDYLDAPVS
GGEIGAREGT LSIMVGGDEA VFERVKPLFE LLGKNITLVG GNGDGQTCKV ANQIIVALNI
EAVSEALLFA SKAGADPVRV RQALMGGFAS SRILEVHGER MIKRTFNPGF KIALHQKDLN
LALQSAKALA LNLPNTATCQ ELFNTCAANG GSQLDHSALV QALELMANHK LA