| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0550 |
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| Symbol | gcl |
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| ID | 6145023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 557104 |
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| End bp | 558885 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615444 |
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| Product | glyoxylate carboligase |
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| Protein accession | YP_001742651 |
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| Protein GI | 170682793 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA TGAGAGCCGT TGACGCGGCA ATGTATGTGC TGGAGAAAGA AGGTATCATC
ACCGCCTTCG GCGTTCCGGG AGCTGCAATC AATCCGTTCT ACTCAGCGAT GCGTAAGCAC
GGCGGTATTC GTCACATTCT GGCGCGTCAT GTGGAAGGTG CTTCGCACAT GGCGGAAGGT
TATACCCGCG CAACGGCAGG GAATATCGGC GTATGTCTGG GGACTTCCGG TCCTGCGGGC
ACGGACATGA TCACCGCGCT CTATTCTGCT TCTGCTGATT CCATTCCTAT TCTGTGTATT
ACCGGCCAGG TTCCGCGCGC CCGTCTGCAT AAAGAAGATT TCCAGGCCGT TGATATTGAA
GCAATTGCTA AACCGGTCAG CAAAATGGCG GTTACAGTTC GTGAAGCGGC GCTGGTGCCT
CGTGTGCTGC AACAGGCGTT TCACCTGATG CGTTCTGGTC GCCCGGGTCC GGTACTGGTG
GATTTACCGT TCGACGTTCA GGTTGCGGAA ATCGAGTTTG ATCCTGACAT GTACGAACCG
CTGCCGGTCT ACAAACCTGC TGCCAGCCGT ATGCAGATCG AAAAAGCTGT AGAAATGTTA
ATTCAGGCCG AACGTCCGGT GATTGTTGCC GGGGGCGGGG TAATCAATGC TGACGCTGCT
GCACTGTTAC AACAGTTTGC TGAACTGACC AGCGTTCCGG TGATCCCAAC GCTGATGGGC
TGGGGCTGTA TTCCCGACGA TCATGAACTG ATGGCCGGGA TGGTGGGTCT GCAAACCGCG
CATCGTTACG GTAACGCAAC GCTGCTGGCG TCCGACATGG TGTTTGGTAT CGGTAACCGT
TTTGCTAACC GTCATACCGG TTCGGTAGAG AAATACACCG AAGGGCGCAA AATCGTTCAT
ATCGATATTG AGCCGACGCA AATTGGCCGC GTGCTGTGTC CGGATCTCGG CATTGTCTCT
GATGCTAAAG CAGCGCTGAC GCTGCTGGTT GAAGTGGCGC AGGAGATGCA AAAAGCGGGT
CGTCTGCCGT GTCGTAAAGA ATGGGTCGCC GACTGCCAGC AGCGCAAACG CACTTTGCTG
CGCAAAACCC ACTTCGACAA TGTGCCGGTG AAACCGCAGC GCGTGTATGA AGAGATGAAC
AAAGCCTTTG GTCGCGATGT TTGTTATGTC ACCACCATTG GTCTGTCACA AATCGCTGCG
GCACAAATGC TGCATGTCTT TAAAGACCGC CACTGGATCA ACTGTGGGCA GGCAGGCCCG
TTGGGCTGGA CCATTCCGGC GGCGCTGGGC GTGTGTGCCG CTGATCCAGA GCGCAATGTG
GTGGCGATTT CCGGTGACTT CGACTTCCAG TTCCTGATTG AAGAATTAGC CGTTGGCGCA
CAGTTCAATA TTCCGTACAT CCATGTACTG GTGAACAACG CTTATCTGGG GCTGATTCGC
CAGTCGCAGC GCGCGTTTGA TATGGATTAC TGCGTACAGC TCGCTTTCGA AAATATTAAC
TCCAGCGAAG TGAACGGTTA TGGCGTCGAC CACGTAAAAG TAGCGGAAGG TTTAGGTTGT
AAAGCAATTC GCGTTTTCAA ACCGGAAGAT ATTGCACCAG CCTTTGAACA GGCGAAAGTC
TTAATAGCGC AATATCGGGT ACCTGTAGTC GTGGAAGTTA TTCTCGAGCG TGTGACCAAT
ATTTCGATGG GCAGTGAACT GGATAACGTC ATGGAATTTG AAGATATCGC CGATAACGCA
GCGGACGCAC CGACTGAAAC CTGTTTCATG CACTATGAAT AA
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| Protein sequence | MAKMRAVDAA MYVLEKEGII TAFGVPGAAI NPFYSAMRKH GGIRHILARH VEGASHMAEG
YTRATAGNIG VCLGTSGPAG TDMITALYSA SADSIPILCI TGQVPRARLH KEDFQAVDIE
AIAKPVSKMA VTVREAALVP RVLQQAFHLM RSGRPGPVLV DLPFDVQVAE IEFDPDMYEP
LPVYKPAASR MQIEKAVEML IQAERPVIVA GGGVINADAA ALLQQFAELT SVPVIPTLMG
WGCIPDDHEL MAGMVGLQTA HRYGNATLLA SDMVFGIGNR FANRHTGSVE KYTEGRKIVH
IDIEPTQIGR VLCPDLGIVS DAKAALTLLV EVAQEMQKAG RLPCRKEWVA DCQQRKRTLL
RKTHFDNVPV KPQRVYEEMN KAFGRDVCYV TTIGLSQIAA AQMLHVFKDR HWINCGQAGP
LGWTIPAALG VCAADPERNV VAISGDFDFQ FLIEELAVGA QFNIPYIHVL VNNAYLGLIR
QSQRAFDMDY CVQLAFENIN SSEVNGYGVD HVKVAEGLGC KAIRVFKPED IAPAFEQAKV
LIAQYRVPVV VEVILERVTN ISMGSELDNV MEFEDIADNA ADAPTETCFM HYE
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