| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0545 |
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| Symbol | |
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| ID | 6143083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 550775 |
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| End bp | 553189 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641615439 |
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| Product | efflux ABC transporter, permease protein |
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| Protein accession | YP_001742646 |
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| Protein GI | 170683536 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAC GTTGGTTCTG GCGCGAATGG CGCTCGCCGT CGCTATTAAT TGTCTGGCTG
GCGCTAAGCC TGGCGGTGGC CTGCGTGCTG GCGCTGGGCA ATATCAGCGA TCGCATGGAG
AAGGGCTTAA GCCAGCAAAG CCGGGAGTTT ATGGCGGGCG ATCGGGCGTT GCGCAGTTCG
CGCGAAGTGC CGCAAGCGTG GCTGGAGGAA GCGCAAAAGC GCGGCCTGAA AGTCGGCAAG
CAGCTGACTT TCGCCACCAT GACATTTGCA GGCGACACAC CGCAGCTGGC GAACGTCAAA
GCGGTGGATG ATATCTACCC GATGTATGGC GATCTGCAAA CCAATCCCCC AGGCCTGAAA
CCGCAGGCGG GCAGCGTATT GCTGGCCCCA CGCCTGATGG CACTGCTTAA CCTGAAAACG
GGCGACACCA TTGACGTGGG CGATGCCACC TTGCGGATTG CCGGAGAAGT GATTCAGGAA
CCGGATTCCG GTTTTAACCC CTTCCAGATG GCTCCGCGTC TGATGATGAA TCTGGCGGAT
GTCGATAAAA CCGGAGCCGT GCAGCCGGGA AGTCGGGTCA CCTGGCGCTA TAAATTCGGC
GGCAACGAGA ACCAGCTCGA CGGCTATGAG AAATGGTTGT TACCCCAGCT TAAACCCGAA
CAACGCTGGT ACGGTCTGGA ACAGGACGAA GGCGCGCTGG GGCGCTCGAT GGAACGCTCG
CAACAGTTCC TGCTGCTTTC TGCGCTTCTG ACCTTGCTGC TGGCAGTGGC AGCGGTGGCG
GTGGCGATGA ATCATTACTG TCGCAGTCGC TACGATCTGG TGGCGATCCT CAAAACGCTG
GGGGCAGGGC GAGCGCAACT GCGTAAGCTA ATCGTCGGTC AGTGGTTGAT GGTGCTGACG
CTTTCAGCCG TTACCGGTGG GGCGATAGGC CTGTTGTTCG AAAACGTGTT GATGGTGCTG
CTCAAGCCCG TTCTGCCTGC CGCACTACCG CCAGCCAGCC TCTGGCCGTG GCTGTGGGCG
CTCGGCACCA TGACGGTTAT CTCGCTGCTG GTGGGGCTAC GACCATACCG CTTGTTGCTG
GCAACGCAGC CTTTACGCGT ATTACGTAAT GATGTGGTAG CGAACGTCTG GCCGCTGAAG
TTTTATCTGC CGATTGTCAG TGTAGTGGTT GTGCTGCTGC TCGCCGGATT AATGGGTGGC
AGCATGCTGC TTTGGGCGGT GCTGGCGGGC GCGGTAGTAC TGGCTTTGCT GTGCGGTGTG
CTGGGCTGGA TGCTGCTGAA TGTACTTCGC CGCATGACGC TGAAATCGCT GCCTCTGCGC
CTGGCGGTTA GCCGCCTGTT ACGTCAGCCG TGGTCAACGT TAAGCCAGCT TTCGGCATTT
TCGCTCTCCT TTATGCTGCT GGCACTGCTG CTGGTGTTGC GTGGCGATCT GCTCGACCGC
TGGCAGCAGC AGCTACCTCC AGAAAGCCCG AACTACTTTT TAATTAACAT CGCCACAGAA
CAGGTAGCAC CGCTAAAAGC GTTCCTCGCG GAACATCAGA TAGTCCCGGA ATCGTTTTAT
CCGGTGGTGC GGGCGAGACT GACGGCGATT AACGGCAAGC CGACAGAAGG CAATGAAGAT
GAGGCGCTCA ATCGCGAACT CAATCTTACC TGGCAAAATA CGCGGCCCGA TCATAATCCG
ATTGTCGCCG GTAACTGGCC GCCAAAAGCC GATGAAGTGT CGATGGAAGA GGGGCTGGCG
AAACGCTTAA ACGTTGCCCT CGGTGATACC GTGACTTTTA TGGGCGATAC CCAGGAGTTC
CGCGCTAAAG TGACCAGCCT GCGCAAAGTG GACTGGGAAA GTCTGCGGCC TAATTTCTAT
TTTATTTTCC CTGAAGGGGC ATTAGACGGG CAACCGCAGA GCTGGCTTAC CAGTTTCCGC
TGGGAGAATG GCAACGGCAT GTTGACGCAA CTCAACCGCC AGTTCCCGAC CATTAGCCTG
TTAGACATTG GCGCGATTTT AAAACAGGTC GGTCAGGTGC TGGAGCAGGT AAGTCGGGCG
CTGGAGGTGA TGGTGGTGCT GGTCACCGCC TGCGGTATGT TGCTGTTGCT GGCACAGGTG
CAGGTGGGAA TGCGTCAGCG TCATCAGGAG CTGGTGGTGT GGCGCACACT CGGTGCGGGG
AAAAAGCTGC TGCGCACGAC ATTGTGGTGT GAGTTCGCCA TGCTTGGGTT TGTTTCTGGC
CTGGTGGCCG CAATTGGTGC GGAAACGGCG CTGGCAGTGT TGCAGGCGAA AGTGTTTGAT
TTCCCGTGGG AGCCAGACTG GCGATTGTGG ATTGTGCTGC CGTGCAGCGG TGCGCTGCTG
CTGTCGCTTT GCGGCGGCTG GCTGGGTGCG CGACTGGTTA AGGGTAAGGC GCTGTTCAGG
CAGTTTGCGG GATGA
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| Protein sequence | MIARWFWREW RSPSLLIVWL ALSLAVACVL ALGNISDRME KGLSQQSREF MAGDRALRSS
REVPQAWLEE AQKRGLKVGK QLTFATMTFA GDTPQLANVK AVDDIYPMYG DLQTNPPGLK
PQAGSVLLAP RLMALLNLKT GDTIDVGDAT LRIAGEVIQE PDSGFNPFQM APRLMMNLAD
VDKTGAVQPG SRVTWRYKFG GNENQLDGYE KWLLPQLKPE QRWYGLEQDE GALGRSMERS
QQFLLLSALL TLLLAVAAVA VAMNHYCRSR YDLVAILKTL GAGRAQLRKL IVGQWLMVLT
LSAVTGGAIG LLFENVLMVL LKPVLPAALP PASLWPWLWA LGTMTVISLL VGLRPYRLLL
ATQPLRVLRN DVVANVWPLK FYLPIVSVVV VLLLAGLMGG SMLLWAVLAG AVVLALLCGV
LGWMLLNVLR RMTLKSLPLR LAVSRLLRQP WSTLSQLSAF SLSFMLLALL LVLRGDLLDR
WQQQLPPESP NYFLINIATE QVAPLKAFLA EHQIVPESFY PVVRARLTAI NGKPTEGNED
EALNRELNLT WQNTRPDHNP IVAGNWPPKA DEVSMEEGLA KRLNVALGDT VTFMGDTQEF
RAKVTSLRKV DWESLRPNFY FIFPEGALDG QPQSWLTSFR WENGNGMLTQ LNRQFPTISL
LDIGAILKQV GQVLEQVSRA LEVMVVLVTA CGMLLLLAQV QVGMRQRHQE LVVWRTLGAG
KKLLRTTLWC EFAMLGFVSG LVAAIGAETA LAVLQAKVFD FPWEPDWRLW IVLPCSGALL
LSLCGGWLGA RLVKGKALFR QFAG
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