Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0539 |
Symbol | |
ID | 6145784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 546161 |
End bp | 546838 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641615433 |
Product | putative ABC transporter ATP-binding protein YbbL |
Protein accession | YP_001742640 |
Protein GI | 170679660 |
COG category | [R] General function prediction only |
COG ID | [COG4619] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAA ATAGTCCTTT GCTTCAGCTA CAAAACGTAG GATATCTGGC GAGTGATGCG AAGATTCTTA ATAACATCAA TTTTTCGCTG CGTGCTGGCG AATTTAAGTT AATTACCGGT CCTTCTGGTT GTGGCAAAAG TACGCTGCTA AAAATAGTTG CTTCATTGAT CAGCCCAACC AGCGGAACGT TACTGTTTGA AGGTGAGGAT GTCAGCACAC TAAAGCCAGA AATCTACCGC CAGCAAGTGT CTTACTGCGC CCAGACGCCG ACGCTGTTTG GCGATACGGT ATACGATAAT CTGATCTTTC CCTGGCAGAT CCGTAACCAG CAGCCTGAAC CAGCCATTTT TCTCGATTTT CTCGAACGCT TCGCTTTGCC GGACACCATT TTGACGAAAA ATATCGCCGA GCTATCTGGT GGTGAAAAAC AACGCATCTC ATTGATTCGT AATCTTCAAT TTATGCCGAA GGTTTTATTG CTGGATGAAA TCACCAGTGC GCTGGATGAA AGTAATAAAC ATAACGTTAA TGAGATGATC CATCGTTATG TGCACGAGCA AAATATTGCC GTGCTGTGGG TGACACACGA TAAAGACGAA ATTAATCATG CGGATAAGGT GATTACACTG CAACCGCATG CCGGAGAAAT GCAGGAAGCA CGCTATGAAC TCGCATAA
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Protein sequence | MQENSPLLQL QNVGYLASDA KILNNINFSL RAGEFKLITG PSGCGKSTLL KIVASLISPT SGTLLFEGED VSTLKPEIYR QQVSYCAQTP TLFGDTVYDN LIFPWQIRNQ QPEPAIFLDF LERFALPDTI LTKNIAELSG GEKQRISLIR NLQFMPKVLL LDEITSALDE SNKHNVNEMI HRYVHEQNIA VLWVTHDKDE INHADKVITL QPHAGEMQEA RYELA
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