Gene EcSMS35_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0530 
SymbolcueR 
ID6145861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp541709 
End bp542116 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content56% 
IMG OID641615424 
ProductDNA-binding transcriptional regulator CueR 
Protein accessionYP_001742631 
Protein GI170680958 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTA GCGATGTAGC AAAAATTACC GGCCTGACCA GCAAAGCAAT CCGCTTCTAT 
GAAGAGAAGG GGCTGGTGAC GCCGCCGATG CGCAGCGAAA ATGGTTATCG AACCTACACG
CAGCAGCATC TCAACGAACT GACCTTACTG CGGCAGGCAC GCCAGGTGGG CTTTAACCTG
GAAGAGAGCG GCGAGCTGGT GAATCTGTTT AACGATCCGC AGCGTCACAG TGCCGACGTC
AAACGTCGTA CGTTGGAGAA GGTAGCGGAG ATCGAACGGC ATATCGAAGA ACTGCAATCC
ATGCGCAACC AGCTACTGGC GCTGGCGAAT GCCTGCCCCG GTGATGACAG CGCCGACTGC
CCGATTATCG AAAATCTCTC CGGCTGCTGT CATCATCGGG CGGGGTGA
 
Protein sequence
MNISDVAKIT GLTSKAIRFY EEKGLVTPPM RSENGYRTYT QQHLNELTLL RQARQVGFNL 
EESGELVNLF NDPQRHSADV KRRTLEKVAE IERHIEELQS MRNQLLALAN ACPGDDSADC
PIIENLSGCC HHRAG