Gene EcSMS35_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0526 
Symbol 
ID6143050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp535492 
End bp536286 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content53% 
IMG OID641615420 
ProductGumN family protein 
Protein accessionYP_001742627 
Protein GI170683262 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGT TGTACCGGGT AAAAACGCTT TGGGCCGCGC TGCGCGGTAA TCATTACACC 
TGGCCTGCTA TCGATATCTC TCTTCCCGGC AATCGCCATT TTCATCTGAT CGGCAGTATT
CATATGGGTA GCCACGATAT GGCTCCCCTG CCCACCCGTT TGCTCAAAAA GCTCAAAAAC
GCCGATGCGC TGATCGTCGA GGCGGATGTT TCCACCAGCG ATACGCCTTT TGCTAATTTG
CCTGCCTGCG AGGCGCTGGA AGAGCGCATT AGCGAGGAGC AACTCCAAAA CCTGCAGCAC
ATTAGCCAGG AGATGGGCAT TTCTACCTCA CTCTTTTCTA CCCAACCGCT GTGGCAAATC
GCGATGGTTC TTCAGGCGAC GCAGGCACAA AAACTGGGGC TCCGGGCAGA ATATGGTATC
GATTACCAGC TATTGCAGGC GGCGAAGCAA CAACATAAAC CCGTGATTGA ACTGGAAGGG
GCAGAAAACC AGATTGCCAT GTTGCTCCAG CTCCCTGACA AAGGACTGGC ACTGCTGGAC
GATACGCTGA CCCACTGGCA CACCAATGCA CGGTTGCTGC AACAAATGAT GAGCTGGTGG
CTGAATGCAC CGCCGCAAAA TAATGAAATA ACGCTGCCCA ATACGTTCAG TCAGTCGCTG
TACGATGTGC TGATGCATCA GCGAAATCTC GCCTGGCGGG ATAAATTACG CGCCATGCCG
CCGGGGCGAT ATGTGGTCGC GGTCGGTGCA CTACACCTGT ATGGAGAAGG GAATTTGCCG
CAAATGTTGC GCTAA
 
Protein sequence
MDLLYRVKTL WAALRGNHYT WPAIDISLPG NRHFHLIGSI HMGSHDMAPL PTRLLKKLKN 
ADALIVEADV STSDTPFANL PACEALEERI SEEQLQNLQH ISQEMGISTS LFSTQPLWQI
AMVLQATQAQ KLGLRAEYGI DYQLLQAAKQ QHKPVIELEG AENQIAMLLQ LPDKGLALLD
DTLTHWHTNA RLLQQMMSWW LNAPPQNNEI TLPNTFSQSL YDVLMHQRNL AWRDKLRAMP
PGRYVVAVGA LHLYGEGNLP QMLR