Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0526 |
Symbol | |
ID | 6143050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 535492 |
End bp | 536286 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615420 |
Product | GumN family protein |
Protein accession | YP_001742627 |
Protein GI | 170683262 |
COG category | [S] Function unknown |
COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGT TGTACCGGGT AAAAACGCTT TGGGCCGCGC TGCGCGGTAA TCATTACACC TGGCCTGCTA TCGATATCTC TCTTCCCGGC AATCGCCATT TTCATCTGAT CGGCAGTATT CATATGGGTA GCCACGATAT GGCTCCCCTG CCCACCCGTT TGCTCAAAAA GCTCAAAAAC GCCGATGCGC TGATCGTCGA GGCGGATGTT TCCACCAGCG ATACGCCTTT TGCTAATTTG CCTGCCTGCG AGGCGCTGGA AGAGCGCATT AGCGAGGAGC AACTCCAAAA CCTGCAGCAC ATTAGCCAGG AGATGGGCAT TTCTACCTCA CTCTTTTCTA CCCAACCGCT GTGGCAAATC GCGATGGTTC TTCAGGCGAC GCAGGCACAA AAACTGGGGC TCCGGGCAGA ATATGGTATC GATTACCAGC TATTGCAGGC GGCGAAGCAA CAACATAAAC CCGTGATTGA ACTGGAAGGG GCAGAAAACC AGATTGCCAT GTTGCTCCAG CTCCCTGACA AAGGACTGGC ACTGCTGGAC GATACGCTGA CCCACTGGCA CACCAATGCA CGGTTGCTGC AACAAATGAT GAGCTGGTGG CTGAATGCAC CGCCGCAAAA TAATGAAATA ACGCTGCCCA ATACGTTCAG TCAGTCGCTG TACGATGTGC TGATGCATCA GCGAAATCTC GCCTGGCGGG ATAAATTACG CGCCATGCCG CCGGGGCGAT ATGTGGTCGC GGTCGGTGCA CTACACCTGT ATGGAGAAGG GAATTTGCCG CAAATGTTGC GCTAA
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Protein sequence | MDLLYRVKTL WAALRGNHYT WPAIDISLPG NRHFHLIGSI HMGSHDMAPL PTRLLKKLKN ADALIVEADV STSDTPFANL PACEALEERI SEEQLQNLQH ISQEMGISTS LFSTQPLWQI AMVLQATQAQ KLGLRAEYGI DYQLLQAAKQ QHKPVIELEG AENQIAMLLQ LPDKGLALLD DTLTHWHTNA RLLQQMMSWW LNAPPQNNEI TLPNTFSQSL YDVLMHQRNL AWRDKLRAMP PGRYVVAVGA LHLYGEGNLP QMLR
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