Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0506 |
Symbol | acrA |
ID | 6144292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 512739 |
End bp | 513968 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641615400 |
Product | acriflavine resistance protein A |
Protein accession | YP_001742607 |
Protein GI | 170681835 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.951175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCAATT TGAAATCGGA CACTCGAGGT TTACATATGA ACAAAAACAG AGGGTTTACG CCTCTGGCGG TCGTTCTGAT GCTCTCAGGC AGCTTAGCCC TAACAGGATG TGACGACAAA CAGGCCCAAC AAGGTGGCCA GCAGATGCCC GCCGTTGGCG TAGTAACAGT CAAAACTGAA CCTCTGCAGA TCACAACCGA GCTTCCGGGT CGCACCAGTG CCTACCGGAT CGCAGAAGTT CGTCCTCAAG TTAGCGGGAT TATCCTGAAG CGTAATTTCA AAGAAGGTAG CGACATCGAA GCAGGTGTCT CTCTCTATCA GATTGATCCT GCGACCTATC AGGCGGCATA CGACAGTGCG AAAGGTGATC TGGCGAAAGC CCAGGCTGCA GCCAATATCG CGCAATTGAC GGTGAATCGT TATCAGAAAT TGCTCGGTAC TCAGTACATC AGTAAGCAAG AGTACGATCA GGCTCTGGCT GATGCGCAAC AGGCGAATGC TGCGGTCACT GCGGCGAAAG CTGCCGTTGA AACTGCGCGG ATCAATCTGG CTTACACCAA AGTCACCTCG CCGATTAGCG GTCGCATTGG TAAGTCGAAC GTGACAGAAG GCGCATTGGT ACAGAACGGT CAGGCGACTG CGCTGGCAAC CGTGCAGCAA CTTGATCCGA TCTACGTTGA TGTGACCCAG TCCAGCAACG ACTTCCTGCG CCTGAAACAG GAACTGGCAA ATGGCACGCT GAAACAAGAG AACGGCAAAG CCAAAGTGTC GCTGATCACC AGTGACGGCA TTAAGTTCCC GCAGGACGGT ACGCTGGAAT TCTCTGACGT TACCGTTGAT CAGACCACCG GGTCTATCAC CCTACGCGCT ATCTTCCCGA ACCCGGATCA CACTCTGCTG CCGGGTATGT TCGTACGTGC GCGTCTGGAA GAAGGGCTTA ATCCAAACGC TATTTTAGTC CCGCAACAGG GCGTAACCCG TACGCCGCGT GGCGATGCCA CCGTACTGGT GGTTGGCGCG GATGACAAAG TGGAAACCCG TCCGATCGTT GCAAGCCAGG CTATCGGCGA TAAGTGGCTG GTGACAGAAG GTCTGAAAGC AGGCGATCGC GTAGTAATAA GTGGGCTGCA GAAAGTGCGT CCTGGTGTCC AGGTAAAAGC ACAAGAAGTT ACCGCTGATA ATAACCAGCA AGCCGCAAGC GGTGCTCAGC CTGAACAGTC CAAGTCTTAA
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Protein sequence | MTNLKSDTRG LHMNKNRGFT PLAVVLMLSG SLALTGCDDK QAQQGGQQMP AVGVVTVKTE PLQITTELPG RTSAYRIAEV RPQVSGIILK RNFKEGSDIE AGVSLYQIDP ATYQAAYDSA KGDLAKAQAA ANIAQLTVNR YQKLLGTQYI SKQEYDQALA DAQQANAAVT AAKAAVETAR INLAYTKVTS PISGRIGKSN VTEGALVQNG QATALATVQQ LDPIYVDVTQ SSNDFLRLKQ ELANGTLKQE NGKAKVSLIT SDGIKFPQDG TLEFSDVTVD QTTGSITLRA IFPNPDHTLL PGMFVRARLE EGLNPNAILV PQQGVTRTPR GDATVLVVGA DDKVETRPIV ASQAIGDKWL VTEGLKAGDR VVISGLQKVR PGVQVKAQEV TADNNQQAAS GAQPEQSKS
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