Gene EcSMS35_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0490 
Symbol 
ID6147431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp496697 
End bp497155 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content52% 
IMG OID641615384 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001742591 
Protein GI170683247 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.918354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATA AAATTGACCG TAAGCTGCTG GCCTTGCTAC AGCAGGATTG CACCCTCTCT 
TTGCAGGCAC TGGCTGAAGC CGTTAATCTG ACAACCACCC CCTGCTGGAA GCGTCTGAAA
CGGCTGGAGG ACGACGGTAT CCTTATCGGC AAAGTCGCCC TGCTGGATCC GGAAAAAATA
GGCCTCGGCC TGACCGCCTT TGTGCTGATA AAAACGCAAC ATCACAGCAG CGAATGGTAT
TGCCGCTTTG TCACGGTGGT TACCGAAATG CCAGAAGTGC TGGGGTTCTG GCGCATGGCC
GGTGAATACG ATTATCTGAT GCGCGTCCAG GTTGCCGACA TGAAACGCTA CGACGAGTTT
TATAAGCGTC TGGTAAACAG CGTGCCGGGG CTGTCGGACG TCACTTCCAG CTTCGCGATG
GAACAGATTA AATACACCAC TTCTTTACCC ATCGAATAA
 
Protein sequence
MLDKIDRKLL ALLQQDCTLS LQALAEAVNL TTTPCWKRLK RLEDDGILIG KVALLDPEKI 
GLGLTAFVLI KTQHHSSEWY CRFVTVVTEM PEVLGFWRMA GEYDYLMRVQ VADMKRYDEF
YKRLVNSVPG LSDVTSSFAM EQIKYTTSLP IE