| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0481 |
|---|
| Symbol | clpX |
|---|
| ID | 6147502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 485728 |
|---|
| End bp | 487002 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641615375 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_001742582 |
|---|
| Protein GI | 170682782 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000637699 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA AACGCAAAGA TGGCTCAGGC AAATTGCTGT ATTGCTCTTT TTGCGGCAAA
AGCCAGCATG AAGTGCGCAA GCTGATTGCC GGTCCATCCG TGTATATCTG CGACGAATGT
GTTGATTTAT GTAACGACAT CATTCGCGAA GAGATTAAAG AAGTTGCACC GCATCGTGAA
CGCAGTGCGC TACCGACGCC GCATGAAATT CGCAACCACC TGGACGATTA CGTTATCGGT
CAGGAACAGG CGAAAAAAGT GCTGGCGGTC GCGGTATACA ACCACTACAA ACGTCTGCGC
AACGGAGATA CCAGCAATGG CGTCGAGTTG GGCAAAAGTA ACATTCTGCT GATCGGTCCG
ACCGGTTCCG GTAAAACGCT GCTGGCCGAA ACGCTGGCGC GCCTGCTGGA CGTTCCGTTC
ACCATGGCTG ACGCAACCAC GCTGACCGAA GCCGGTTATG TGGGCGAAGA CGTTGAAAAC
ATCATTCAGA AGCTGTTGCA GAAGTGCGAT TACGACGTAC AGAAAGCGCA GCGCGGGATT
GTCTACATCG ATGAAATTGA CAAGATTTCT CGTAAGTCAG ACAACCCGTC CATTACCCGA
GACGTTTCCG GTGAAGGCGT ACAGCAGGCA CTGTTAAAAC TGATCGAAGG TACGGTAGCT
GCTGTTCCGC CGCAAGGTGG GCGTAAACAT CCGCAGCAGG AATTCTTGCA GGTTGATACC
TCTAAGATCC TGTTTATCTG TGGCGGTGCG TTTGCCGGTC TGGATAAAGT GATTTCCCAT
CGAGTAGAAA CCGGTTCCGG CATTGGTTTT GGCGCGACGG TAAAAGCGAA GTCCGACAAA
GCAAGCGAAG GTGAACTGCT GGCGCAGGTT GAACCGGAAG ATCTGATCAA GTTTGGTCTG
ATCCCTGAGT TCATTGGTCG TCTGCCGGTT GTCGCAACGT TGAATGAACT GAGCGAAGAA
GCTCTGATTC AGATCCTCAA AGAGCCGAAA AACGCCCTGA CCAAGCAGTA TCAGGCGCTG
TTTAATCTGG AAGGTGTGGA TCTGGAATTC CGTGACGAGG CGCTGGATGC TATCGCTAAG
AAAGCGATGG CGCGTAAAAC CGGTGCCCGT GGCCTGCGTT CCATCGTAGA AGCCGCACTG
CTCGATACCA TGTACGATCT GCCGTCCATG GAAGACGTCG AAAAAGTGGT TATCGACGAA
TCGGTAATTG ATGGTCAAAG CAAGCCGTTG CTGATTTATG GCAAGCCGGA AGCGCAACAG
GCATCTGGTG AATAA
|
|---|
| Protein sequence | MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVAPHRE
RSALPTPHEI RNHLDDYVIG QEQAKKVLAV AVYNHYKRLR NGDTSNGVEL GKSNILLIGP
TGSGKTLLAE TLARLLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI
VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTVA AVPPQGGRKH PQQEFLQVDT
SKILFICGGA FAGLDKVISH RVETGSGIGF GATVKAKSDK ASEGELLAQV EPEDLIKFGL
IPEFIGRLPV VATLNELSEE ALIQILKEPK NALTKQYQAL FNLEGVDLEF RDEALDAIAK
KAMARKTGAR GLRSIVEAAL LDTMYDLPSM EDVEKVVIDE SVIDGQSKPL LIYGKPEAQQ
ASGE
|
|---|
| |