| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0480 |
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| Symbol | clpP |
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| ID | 6146328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 484979 |
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| End bp | 485602 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641615374 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001742581 |
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| Protein GI | 170683276 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000207695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATACA GCGGCGAACG AGATAACTTT GCACCCCATA TGGCGCTGGT GCCGATGGTC
ATTGAACAGA CCTCACGAGG TGAGCGCTCT TTTGATATCT ATTCTCGTCT ACTTAAGGAA
CGCGTCATTT TTCTGACTGG CCAGGTTGAA GACCACATGG CTAACCTGAT TGTGGCGCAG
ATGCTGTTCC TGGAAGCAGA AAACCCAGAA AAAGATATCT ATCTGTACAT TAACTCTCCA
GGCGGGGTGA TTACTGCCGG GATGTCTATC TATGACACCA TGCAGTTTAT CAAGCCTGAT
GTCAGCACCA TCTGTATGGG CCAGGCGGCC TCGATGGGCG CTTTCTTGCT GACTGCAGGG
GCAAAAGGTA AACGTTTCTG CCTGCCGAAT TCGCGCGTGA TGATTCACCA GCCGTTGGGC
GGCTACCAGG GCCAGGCGAC CGATATCGAA ATTCATGCCC GTGAAATTCT GAAAGTTAAA
GGGCGCATGA ATGAACTTAT GGCGCTTCAT ACGGGTCAAT CATTAGAACA GATTGAACGT
GATACCGAGC GCGATCGCTT CCTTTCCGCC CCTGAAGCGG TGGAATACGG TCTGGTCGAT
TCGATTCTGA CCCATCGTAA TTGA
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| Protein sequence | MSYSGERDNF APHMALVPMV IEQTSRGERS FDIYSRLLKE RVIFLTGQVE DHMANLIVAQ
MLFLEAENPE KDIYLYINSP GGVITAGMSI YDTMQFIKPD VSTICMGQAA SMGAFLLTAG
AKGKRFCLPN SRVMIHQPLG GYQGQATDIE IHAREILKVK GRMNELMALH TGQSLEQIER
DTERDRFLSA PEAVEYGLVD SILTHRN
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