Gene EcSMS35_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0475 
Symbol 
ID6147019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp481891 
End bp482469 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content51% 
IMG OID641615369 
Producthypothetical protein 
Protein accessionYP_001742576 
Protein GI170681187 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3056] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000010636 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.521342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAA AAATCCTCTT CCCGTTAGTT GCTCTGTTTA TGCTTGCAGG ATGCGCAAAA 
CCGCCAACAA CTATTGAAGT TTCACCGACG ATAACACTGC CACAGCAGGA TCCAAGCCTG
ATGGGCGTCA CCGTAAGCAT TAATGGTGCC GATCAGCGTA CCGATCAGGC GCTGGCAAAA
GTCACCCGCG ATAATCAAAT CGTTACCCTG ACCGCCTCCC GCGATCTGCG TTTCCTGCTG
CAAGAAGTGC TGGAAAAACA GATGACCGCG CGTGGTTACA TGGTTGGTCC GAATGGCCCG
GTTAATCTGC AAATCATCGT TAGCCAACTG TATGCTGACG TGTCCCAGGG CAACGTGCGC
TATAACATCG CCACCAAAGC GGATATCGCT ATCATCGCTA CCGCGCAGAA TGGCAACAAA
ATGACCAAAA ACTATCGTGC CAGCTACAAC GTTGAAGGTG CGTTCCAGGC CTCCAACAAA
AATATCGCCG ATGCGGTTAA CAGTGTGCTG ACCGATACCA TCGCTGATAT GTCTCAGGAC
ACCAGCATCC ACGAATTCAT CAAGCAGAAC GCGCGTTAA
 
Protein sequence
MFKKILFPLV ALFMLAGCAK PPTTIEVSPT ITLPQQDPSL MGVTVSINGA DQRTDQALAK 
VTRDNQIVTL TASRDLRFLL QEVLEKQMTA RGYMVGPNGP VNLQIIVSQL YADVSQGNVR
YNIATKADIA IIATAQNGNK MTKNYRASYN VEGAFQASNK NIADAVNSVL TDTIADMSQD
TSIHEFIKQN AR