| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0470 |
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| Symbol | cyoC |
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| ID | 6142989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 476348 |
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| End bp | 476962 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615364 |
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| Product | cytochrome o ubiquinol oxidase subunit III |
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| Protein accession | YP_001742571 |
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| Protein GI | 170680623 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
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| TIGRFAM ID | [TIGR02842] cytochrome o ubiquinol oxidase, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0234669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.574469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACTG ATACTTTGAC GCACGCGACT GCCCACGCGC ACGAACACGG GCACCACGAT
GCAGGCGGAA CCAAAATCTT CGGATTTTGG ATCTACCTGA TGAGCGACTG CATTCTGTTC
TCTATCTTGT TTGCTACCTA TGCCGTTCTG GTTAACGGCA CCGCAGGCGG CCCGACAGGT
AAGGACATTT TCGAACTGCC GTTCGTTCTG GTTGAAACTT TCTTGCTGTT GTTCAGCTCC
ATCACCTACG GCATGGCGGC TATCGCCATG TACAAAAACA ACAAAAGCCA GGTTATCTCC
TGGCTGGCGT TGACCTGGTT GTTTGGTGCC GGATTTATCG GGATGGAAAT CTATGAATTC
CATCACCTGA TTGTTAACGG CATGGGTCCG GATCGCAGCG GCTTCCTGTC AGCGTTCTTT
GCGCTGGTCG GCACGCACGG TCTGCACGTC ACTTCCGGTC TTATCTGGAT GGCGGTGCTG
ATGGTGCAAA TCGCCCGTCG CGGCCTGACC AGCACTAACC GTACCCGCAT CATGTGCCTG
AGCCTGTTCT GGCACTTCCT GGATGTGGTT TGGATCTGTG TGTTCACTGT TGTTTATCTG
ATGGGGGCGA TGTAA
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| Protein sequence | MATDTLTHAT AHAHEHGHHD AGGTKIFGFW IYLMSDCILF SILFATYAVL VNGTAGGPTG
KDIFELPFVL VETFLLLFSS ITYGMAAIAM YKNNKSQVIS WLALTWLFGA GFIGMEIYEF
HHLIVNGMGP DRSGFLSAFF ALVGTHGLHV TSGLIWMAVL MVQIARRGLT STNRTRIMCL
SLFWHFLDVV WICVFTVVYL MGAM
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