| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0469 |
|---|
| Symbol | cyoD |
|---|
| ID | 6146653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 476019 |
|---|
| End bp | 476348 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641615363 |
|---|
| Product | cytochrome o ubiquinol oxidase subunit IV |
|---|
| Protein accession | YP_001742570 |
|---|
| Protein GI | 170683697 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 |
|---|
| TIGRFAM ID | [TIGR02847] cytochrome o ubiquinol oxidase subunit IV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.20834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.536254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT CTACCGATCA CAGCGGCGCG TCCCATGGCA GCGTAAAAAC CTACATGACA
GGCTTTATCC TGTCGATCAT TCTGACGGTG ATTCCGTTCT GGATGGTGAT GACAGGAGCT
GCCTCTCCGG CCGTAATTCT GGGAACAATC CTGGCAATGG CAGTGGTACA GGTTCTGGTG
CATCTGGTGT GCTTCCTGCA CATGAATACC AAATCAGATG AAGGCTGGAA CATGACGGCG
TTTGTCTTCA CCGTGCTAAT CATCGCTATC CTGGTTGTAG GCTCCATCTG GATTATGTGG
AACCTCAACT ACAACATGAT GATGCACTAA
|
|---|
| Protein sequence | MSHSTDHSGA SHGSVKTYMT GFILSIILTV IPFWMVMTGA ASPAVILGTI LAMAVVQVLV
HLVCFLHMNT KSDEGWNMTA FVFTVLIIAI LVVGSIWIMW NLNYNMMMH
|
|---|
| |