| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0468 |
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| Symbol | cyoE |
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| ID | 6144229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 475117 |
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| End bp | 476007 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615362 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001742569 |
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| Protein GI | 170682454 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.519171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.259117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTTA AGCAATACCT GCAAGTAACG AAACCAGGCA TCATCTTTGG CAACCTGATC
TCGGTGATTG GGGGATTCCT GCTGGCCTCA AAGGGCAGCA TTGATTATCC CCTGTTTATC
TACACGCTGG TTGGGGTGTC ACTGGTTGTG GCGTCGGGTT GTGTGTTTAA CAACTACATC
GACAGGGATA TCGACAGAAA GATGGAAAGG ACGAAGAATC GGGTGCTGGT TAAAGGCCTG
ATCTCTCCTG CTGTCTCGCT GGTGTACGCC ACCTTGCTGG GTATTGCTGG CTTTATGCTG
CTGTGGTTTG GCGCGAATCC GCTGGCCTGC TGGCTGGGGG TGATGGGCTT TGTGGTTTAT
GTCGGCGTCT ACAGCCTGTA CATGAAACGC CACTCGGTCT ACGGCACATT GATTGGTTCG
CTCTCCGGCG CAGCACCGCC AGTGATCGGC TACTGTGCGG TAACCGGCGA GTTCGATAGC
GGCGCAGCAA TCCTGCTGGC TATCTTCAGC CTGTGGCAGA TGCCTCATTC TTATGCCATC
GCCATTTTCC GCTTTAAGGA TTATCAGGCC GCAAACATTC CGGTACTGCC GGTGGTGAAA
GGCATTTCGG TGGCGAAGAA TCACATCACG CTGTATATCA TCGCCTTTGC CGTTGCCACG
CTGATGCTCT CTCTTGGCGG TTACGCTGGG TATAAATATC TGGTGGTCGC CGCGGCGGTG
AGCGTCTGGT GGTTAGGTAT GGCCCTGCGC GGTTATAAAG TTGCTGATGA TCGAATCTGG
GCGCGCAAGC TGTTCGGCTT CTCTATCATC GCCATCACTG CCCTCTCGGT GATGATGTCC
GTTGATTTTA TGGTGCCGGA CTCGCATACG CTGCTGGCTG CTGTGTGGTA A
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| Protein sequence | MMFKQYLQVT KPGIIFGNLI SVIGGFLLAS KGSIDYPLFI YTLVGVSLVV ASGCVFNNYI
DRDIDRKMER TKNRVLVKGL ISPAVSLVYA TLLGIAGFML LWFGANPLAC WLGVMGFVVY
VGVYSLYMKR HSVYGTLIGS LSGAAPPVIG YCAVTGEFDS GAAILLAIFS LWQMPHSYAI
AIFRFKDYQA ANIPVLPVVK GISVAKNHIT LYIIAFAVAT LMLSLGGYAG YKYLVVAAAV
SVWWLGMALR GYKVADDRIW ARKLFGFSII AITALSVMMS VDFMVPDSHT LLAAVW
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