| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0457 |
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| Symbol | ispA |
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| ID | 6144819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 466233 |
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| End bp | 467132 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615351 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_001742558 |
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| Protein GI | 170683582 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.914114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTC CGCAGCAACT CGAAGCCTGC GTTAAGCAGG CCAACCAGGC GCTGAGCCGT
TTTATCGCCC CACTGCCCTT TCAGAACACT CCCGTGGTCG AAACCATGCA GTATGGCGCA
TTATTAGGTG GTAAGCGCCT GCGACCTTTC CTGGTTTATG CCACTGGTCA TATGTTCGGC
GTTAGCACAA ACACACTGGA CGCACCCGCT GCCGCCGTAG AGTGTATCCA CGCTTACTCA
TTAATTCATG ATGATTTACC GGCGATGGAT GATGACGATC TGCGTCGCGG TTTGCCGACC
TGCCATGTGA AGTTTGGCGA AGCAAACGCG ATTCTCGCTG GTGACGCTTT ACAAACGCTG
GCGTTCTCGA TTCTAAGCGA TGCCGATATG CCGGAAGTGT CAGATCGCGA CAGAATTTCG
ATGATTTCTG AGCTGGCGAG CGCCAGCGGT ATTGCCGGAA TGTGCGGTGG TCAGGCATTA
GATTTAGACG CTGAAGGCAA ACACGTACCT CTGGACGCGC TTGAGCGTAT TCATCGTCAT
AAAACCGGCG CATTGATTCG CGCCGCCGTT CGCCTTGGTG CATTAAGCGC CGGAGATAAA
GGACGTCGTG CTCTGCCAGT ACTCGACAAG TACGCAGAGA GCATCGGCCT TGCCTTCCAG
GTTCAGGATG ACATCCTGGA TGTGGTAGGA GATACTGCAA CGTTGGGAAA ACGCCAGGGT
GCTGACCAGC AACTTGGTAA AAGTACCTAC CCTGCACTTC TGGGTCTTGA GCAAGCCCGG
AAGAAAGCCC GGGATCTGAT CGACGATGCC CGTCAGTCGC TGAAACAACT GGCTGAACAG
TCACTCGATA CCTCGGCACT GGAAGCGCTA GCGGACTACA TCATCCAGCG TAATAAATAA
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| Protein sequence | MDFPQQLEAC VKQANQALSR FIAPLPFQNT PVVETMQYGA LLGGKRLRPF LVYATGHMFG
VSTNTLDAPA AAVECIHAYS LIHDDLPAMD DDDLRRGLPT CHVKFGEANA ILAGDALQTL
AFSILSDADM PEVSDRDRIS MISELASASG IAGMCGGQAL DLDAEGKHVP LDALERIHRH
KTGALIRAAV RLGALSAGDK GRRALPVLDK YAESIGLAFQ VQDDILDVVG DTATLGKRQG
ADQQLGKSTY PALLGLEQAR KKARDLIDDA RQSLKQLAEQ SLDTSALEAL ADYIIQRNK
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