| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0452 |
|---|
| Symbol | nusB |
|---|
| ID | 6144760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 461293 |
|---|
| End bp | 461712 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641615346 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_001742553 |
|---|
| Protein GI | 170681155 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACCTG CTGCTCGTCG CCGCGCTCGT GAGTGTGCCG TCCAGGCGCT CTACTCCTGG
CAGTTGTCCC AGAACGACAT CGCTGATGTT GAATACCAGT TCCTGGCTGA ACAGGATGTA
AAAGACGTTG ACGTCCTGTA CTTCCGTGAG CTGCTGGCCG GGGTGGCGAC TAACACCGCA
TACCTCGACG GACTGATGAA GCCATACCTG TCCCGCCTGC TGGAAGAACT GGGCCAGGTA
GAAAAAGCAG TACTGCGCAT TGCGCTGTAC GAGCTGTCTA AACGTAGCGA TGTGCCATAC
AAAGTGGCCA TTAACGAAGC GATCGAACTG GCGAAATCGT TCGGCGCAGA AGACAGCCAT
AAGTTCGTCA ACGGCGTACT CGATAAAGCA GCACCTGTGA TTCGCCCTAA CAAAAAGTGA
|
|---|
| Protein sequence | MKPAARRRAR ECAVQALYSW QLSQNDIADV EYQFLAEQDV KDVDVLYFRE LLAGVATNTA
YLDGLMKPYL SRLLEELGQV EKAVLRIALY ELSKRSDVPY KVAINEAIEL AKSFGAEDSH
KFVNGVLDKA APVIRPNKK
|
|---|
| |