| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0450 |
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| Symbol | ribD |
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| ID | 6145022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 459611 |
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| End bp | 460714 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641615344 |
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| Product | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_001742551 |
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| Protein GI | 170680144 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGACG AGTATTACAT GGCGCGGGCG CTAAAGCTGG CGCAACGAGG ACGTTTTACC
ACGCATCCCA ACCCGAATGT CGGGTGCGTC ATTGTCAAAG ATGGCGAAAC TGTCGGTGAA
GGTTACCATC AACGAGCGGG TGAACCGCAT GCCGAGGTAC ACGCGTTGCG CATGGCCGGC
GAAAAAGCCA AAGGCGCAAC GGCGTATGTC ACACTCGAAC CCTGTAGCCA TCATGGTCGT
ACGCCACCGT GTTGTGATGC ATTAATTGCT GCGGGCGTGG CGCGCGTGGT TGCTGCAATG
CAAGACCCCA ATCCGCAGGT CGCTGGGCGT GGACTTTACC GTCTACAACA GGCTGGTATT
GACGTCAGCC ACGGGTTGAT GATGAGTGAA GCCGAGCAAT TGAATAAAGG CTTTCTCAAG
CGGATGCGCA CCGGCTTTCC TTATATTCAG TTAAAACTTG GCGCATCGCT TGATGGCCGC
ACGGCGATGG CGAGCGGCGA AAGCCAGTGG ATCACTTCGC CTCAGGCGCG GCGCGACGTA
CAACGACTGC GCGCACAAAG TCATGCCATT TTAACCAGCA GCGCCACGGT GCTGGCGGAT
GATCCAGCCT TAACAGTGCG TTGGTCTGAA CTGGATGAAC AAACTCAGGC GCTCTATCCG
CAACAAAATC TCCGTCAGCC GATACGTATT GTGATTGATA GCCAAAATCG CGTGACGCCG
GAACATCGCA TTGTGCAGCA GCCCGGCGAA ACTTGGTTCG CGCGTACTCA GGATGATTCT
CGTGAGTGGC CGGAAACGGT GCGTACCTTG CTGATTCCAG AGCATAAAGG TCATCTGGAT
CTGGTTGTAC TGATGATGCA ACTGGGTAAA CAGCAAATTA ACAGCATCTG GGTGGAAGCG
GGGCCAACGC TCGCTGGCGC ATTGCTACAG GCGGGGTTAG TCGATGAGCT GATTGTCTAT
ATCGCACCTA AACTATTAGG CAGCGACGCC CGTGGATTAT GCTCGCTGCC AGGGCTTGAG
AAATTAGCCG ACGCCCCCCA ATTTAAATTC AAAGAGATAC GTCATGTAGG CCCGGATGTT
TGCCTGCATT TAGTGGGTGC ATGA
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| Protein sequence | MQDEYYMARA LKLAQRGRFT THPNPNVGCV IVKDGETVGE GYHQRAGEPH AEVHALRMAG
EKAKGATAYV TLEPCSHHGR TPPCCDALIA AGVARVVAAM QDPNPQVAGR GLYRLQQAGI
DVSHGLMMSE AEQLNKGFLK RMRTGFPYIQ LKLGASLDGR TAMASGESQW ITSPQARRDV
QRLRAQSHAI LTSSATVLAD DPALTVRWSE LDEQTQALYP QQNLRQPIRI VIDSQNRVTP
EHRIVQQPGE TWFARTQDDS REWPETVRTL LIPEHKGHLD LVVLMMQLGK QQINSIWVEA
GPTLAGALLQ AGLVDELIVY IAPKLLGSDA RGLCSLPGLE KLADAPQFKF KEIRHVGPDV
CLHLVGA
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