Gene EcSMS35_0449 details

Gene Information

• Locus tag: EcSMS35_0449
• Symbol: nrdR
• ID: 6143940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: +
• Start bp: 459158
• End bp: 459607
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641615343
• Product: transcriptional regulator NrdR
• Protein accession: YP_001742550
• Protein GI: 170680845
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 57
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCATTGCC CATTCTGTTT CGCCGTGGAC ACTAAGGTAA TTGACTCTCG TCTCGTGGGC 
GAGGGTTCAT CCGTACGCCG CCGTCGGCAG TGTCTGGTGT GTAATGAACG TTTCACCACC 
TTTGAAGTGG CGGAGCTGGT TATGCCGCGT GTTGTAAAAA GCAACGACGT GCGTGAACCG 
TTTAATGAAG AGAAATTACG TAGCGGAATG CTGCGGGCGC TGGAAAAACG TCCGGTGAGT 
TCCGATGACG TCGAAATGGC AATCAATCAT ATAAAATCGC AGCTGCGCGC CACCGGTGAG 
CGCGAAGTGC CGAGCAAGAT GATTGGCAAT CTGGTGATGG AGCAATTGAA AAAGCTCGAT 
AAAGTCGCCT ATATCCGTTT TGCCTCTGTC TACCGCAGTT TCGAAGATAT CAAAGAATTT 
GGCGAAGAGA TCGCGCGCCT GGAGGACTAA 

 

Protein sequence

MHCPFCFAVD TKVIDSRLVG EGSSVRRRRQ CLVCNERFTT FEVAELVMPR VVKSNDVREP 
FNEEKLRSGM LRALEKRPVS SDDVEMAINH IKSQLRATGE REVPSKMIGN LVMEQLKKLD 
KVAYIRFASV YRSFEDIKEF GEEIARLED