| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0438 |
|---|
| Symbol | tgt |
|---|
| ID | 6146420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 450059 |
|---|
| End bp | 451186 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641615334 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_001742541 |
|---|
| Protein GI | 170680278 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG AACTGGACAC TACCGACGGT CGCGCACGCC GTGGCCGCCT GGTCTTTGAT
CGTGGCGTAG TGGAAACGCC TTGTTTTATG CCTGTTGGCA CTTACGGCAC CGTAAAAGGG
ATGACGCCGG AAGAAGTTGA AGCCACTGGC GCGCAAATTA TCCTCGGCAA CACCTTCCAC
CTGTGGCTGC GCCCGGGCCA GGAAATCATG AAACTGCATG GCGATCTGCA CGATTTTATG
CAGTGGAAAG GCCCGATTCT TACCGACTCC GGCGGCTTCC AGGTCTTCAG CCTTGGCGAT
ATTCGTAAAA TCACCGAACA GGGCGTTCAC TTCCGTAACC CGATCAACGG CGATCCGATT
TTCCTCGACC CGGAAAAGTC GATGGAGATT CAGTACGATC TTGGTTCGGA TATCGTCATG
ATCTTTGATG AGTGTACGCC GTATCCTGCT GACTGGGATT ACGCAAAACG CTCCATGGAG
ATGTCTCTGC GTTGGGCGAA GCGTAGCCGT GAGCGTTTTG ACAGTCTCGG AAACAAAAAT
GCACTGTTTG GTATCATTCA GGGCAGCGTT TACGAAGATT TACGTGATAT TTCTGTTAAA
GGTCTGGTAG ATATCGGTTT TGATGGCTAC GCTGTCGGCG GTCTGGCTGT GGGTGAGCCG
AAAGCAGATA TGCACCGCAT TCTGGAGCAT GTATGCCCGC AAATTCCGGC AGACAAACCG
CGTTACCTGA TGGGCGTTGG TAAACCAGAA GACCTGGTTG AAGGCGTGCG TCGCGGTATC
GATATGTTTG ACTGCGTAAT GCCAACCCGC AACGCCCGAA ATGGTCATTT GTTCGTGACC
GATGGCGTGG TGAAAATCCG CAATGCGAAG TATAAGAGCG ATACTGGCCC ACTCGATCCT
GAGTGTGATT GCTACACCTG TCGCAATTAT TCACGCGCTT ACTTGCATCA TCTCGACCGT
TGCAACGAAA TATTAGGCGC GCGACTCAAC ACCATTCATA ACCTTCGTTA CTACCAGCGT
TTGATGGCGG GTTTACGCAA GGCTATTGAA GAGGGTAAAT TAGAGAGCTT CGTAACTGAT
TTTTACCAGC GTCAGGGGCG AGAAGTACCA CCTTTGAACG TTGATTAA
|
|---|
| Protein sequence | MKFELDTTDG RARRGRLVFD RGVVETPCFM PVGTYGTVKG MTPEEVEATG AQIILGNTFH
LWLRPGQEIM KLHGDLHDFM QWKGPILTDS GGFQVFSLGD IRKITEQGVH FRNPINGDPI
FLDPEKSMEI QYDLGSDIVM IFDECTPYPA DWDYAKRSME MSLRWAKRSR ERFDSLGNKN
ALFGIIQGSV YEDLRDISVK GLVDIGFDGY AVGGLAVGEP KADMHRILEH VCPQIPADKP
RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFVT DGVVKIRNAK YKSDTGPLDP
ECDCYTCRNY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMAGLRKAIE EGKLESFVTD
FYQRQGREVP PLNVD
|
|---|
| |