| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0427 |
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| Symbol | sbcD |
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| ID | 6146676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 438025 |
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| End bp | 439227 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615323 |
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| Product | exonuclease subunit SbcD |
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| Protein accession | YP_001742530 |
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| Protein GI | 170683006 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.429993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC TTCACACCTC AGACTGGCAT CTCGGCCAGA ACTTCTACAG TAAAAGCCGC
GAAGCTGAAC ATCAGGCTTT TCTTGACTGG CTGCTGGAGA CAGCACAAAC CCATCAGGTG
GATGCGATTA TTGTTGCTGG TGATGTTTTC GATACCGGCT CACCGCCCAG TTACGCCCGC
ACGTTATACA ACCGTTTTGT TGTCAATTTA CAGCAAACTG GCTGTCATCT GGTGGTACTG
GCAGGAAACC ATGACTCGGT CGCCACGCTG AATGAATCGC GCGATATCAT GGCGTTCCTC
AATACTACCG TGGTCGCCAG CGCCGGACAT GCGCCGCAAA TCTTGCCTCG TCGCGACGGG
ACGCCAGGCG CAGTGCTGTG CCCCATACCT TTTTTACGCC CGCGTGACAT TATTACCAGC
CAGGCGGGGC TTAACGGTAT TGAAAAACAG CAGCATTTGC TGGCGGCTAT TACTGATTAT
TATCAACAAC ATTATGCCGA TGCCTGCAAA CTGCGCGGCG ATCAGCCTCT GCCCATCATC
GCCACGGGAC ATTTAACGAC CGTGGGTGCC AGTAAAAGTG ACGCCGTGCG TGACATTTAT
ATTGGCACGC TGGACGCGTT TCCGGCACAA AACTTTCCAC CAGCCGACTA CATCGCGCTC
GGGCATATTC ACCGCGCGCA GATTATTGGC GGCATGGAAC ATGTTCGCTA TTGCGGTTCC
CCCATACCAC TGAGTTTTGA TGAATGCGGT AAGAGTAAAT ATGTCCATCT GGTGACATTT
TCAAACGGCA AATTAGAGAG CGTGGAAAAC CTGAACGTAC CGGTAACGCA ACCCATGGCG
GTGCTGAAAG GCGATCTGGC GTCGATTACC GAACAGCTGG AACAGTGGCG CGATGTATCA
CAGGAGCCAC CTGTCTGGCT GGATATCGAA ATCACTACTG ATGAGTATCT GCATGATATT
CAGCGCAAAA TCCAGGCATT AACCGAATCA TTGCCCGTTG AAGTATTGCT GGTACGCCGG
AGTCGTGAAC AGCGCGAGCG TGTGTTAGCC AGCCAACAGC GTGAAACCCT CAGCGAACTC
AGCGTCGAAG AGGTGTTCAA TCGCCGTCTG GCACTGGAAG AACTGGATGA ATCACAGCAG
CAACGTCTGC AGCATCTTTT CGCCACGACA TTGCATAGCC TCGCCGGAGA ACACGAAGCA
TGA
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| Protein sequence | MRILHTSDWH LGQNFYSKSR EAEHQAFLDW LLETAQTHQV DAIIVAGDVF DTGSPPSYAR
TLYNRFVVNL QQTGCHLVVL AGNHDSVATL NESRDIMAFL NTTVVASAGH APQILPRRDG
TPGAVLCPIP FLRPRDIITS QAGLNGIEKQ QHLLAAITDY YQQHYADACK LRGDQPLPII
ATGHLTTVGA SKSDAVRDIY IGTLDAFPAQ NFPPADYIAL GHIHRAQIIG GMEHVRYCGS
PIPLSFDECG KSKYVHLVTF SNGKLESVEN LNVPVTQPMA VLKGDLASIT EQLEQWRDVS
QEPPVWLDIE ITTDEYLHDI QRKIQALTES LPVEVLLVRR SREQRERVLA SQQRETLSEL
SVEEVFNRRL ALEELDESQQ QRLQHLFATT LHSLAGEHEA
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