| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0425 |
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| Symbol | araJ |
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| ID | 6146639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 433575 |
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| End bp | 434843 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641615321 |
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| Product | MFS transport protein AraJ |
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| Protein accession | YP_001742528 |
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| Protein GI | 170683106 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.87857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCTCGC TGGTCGTTAT CCTGCAAGCT ATCACTTTAT TGGCTACGGT GATTAGTAGC
CGTTCTGGTG GTTGTGATGG TGGTATGAAA AAAGTCATTT TATCTTTGGC TCTGGGCACG
TTTGGTTTGG GGATGGCCGA ATTTGGCATT ATGGGCGTGC TCACGGAGCT GGCGCATAAC
GTAGGAATTT CGATTCCTGC TGCCGGGCAT ATGATCTCGT ATTATGCGCT GGGGGTGGTG
GTCGGTGCGC CAATCATCGC ACTCTTTTCC AGCCGCTACT CACTCAAACA TATCTTATTG
TTTCTGGTGG CGTTGTGCGT CATTGGCAAC GCCATGTTCA CGCTCTCTTC GTCTTACCTG
ATGCTCGCCA TTGGTCGGCT GGTATCCGGC TTTCCGCATG GCGCATTTTT TGGCGTCGGC
GCGATCGTGT TATCAAAAAT TATCAAACCC GGAAAAGTCA CCGCCGCCGT GGCGGGGATG
GTTTCCGGGA TGACAGTCGC CAATTTGCTG GGCATTCCGC TGGGAACGTA TTTAAGTCAG
GAATTTAGCT GGCGTTACAC CTTTTTATTG ATCGCTGTTT TTAATATTGT GGTGATGGCA
TCGGTCTATT TTTGGGTGCC GGATATTCGC GACGAAGCGA AAGGAAAGCT GCGCGAACAA
TTTCACTTTT TACGCAGCCC GGCCCCGTGG TTAATTTTCG CCGCCACCAT GTTTGGCAAC
GCAGGTGTAT TTGCCTGGTT CAGCTACGTA AAGCCATACA TGATGTTTAT TTCCGGTTTT
TCGGAAACGG CGATGACCTT TATTATGATG TTAGTGGGGC TAGGGATGGT GCTGGGGAAT
GTGCTAAGTG GCCGAATTTC AGGACGTTAT TCACCACTGC GCATTGCAGC AGTGACTGAC
TTTATCATTG TACTGGCACT GCTGATGCTC TTTTTCTGCG GCGGCATGAA AATAACGTCG
CTTATTTTTG CTTTTATTTG TTGCGCGGGA TTATTTGCCC TTTCAGCACC TCTGCAAATA
TTGTTACTGC AAAACGCCAA AGGCGGAGAG TTATTAGGTG CCGCAGGTGG GCAAATAGCG
TTTAACCTCG GTAGCGCCGT CGGCGCATAT TGCGGTGGTA TGATGCTGAC GCTGGGGCTG
GCATATAATT ACGTGGCGCT GCCTGCCGCC CTGCTTTCGT TTGCTGCGAT GTCGTCGTTG
CTGCTGTATG GTCGCTATAA GCGCCAGCAA GCGGCGGATA GTCCGGTGCT GGCGAAACCA
CTGGGGTAG
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| Protein sequence | MASLVVILQA ITLLATVISS RSGGCDGGMK KVILSLALGT FGLGMAEFGI MGVLTELAHN
VGISIPAAGH MISYYALGVV VGAPIIALFS SRYSLKHILL FLVALCVIGN AMFTLSSSYL
MLAIGRLVSG FPHGAFFGVG AIVLSKIIKP GKVTAAVAGM VSGMTVANLL GIPLGTYLSQ
EFSWRYTFLL IAVFNIVVMA SVYFWVPDIR DEAKGKLREQ FHFLRSPAPW LIFAATMFGN
AGVFAWFSYV KPYMMFISGF SETAMTFIMM LVGLGMVLGN VLSGRISGRY SPLRIAAVTD
FIIVLALLML FFCGGMKITS LIFAFICCAG LFALSAPLQI LLLQNAKGGE LLGAAGGQIA
FNLGSAVGAY CGGMMLTLGL AYNYVALPAA LLSFAAMSSL LLYGRYKRQQ AADSPVLAKP
LG
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