Gene EcSMS35_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0398 
SymbolhemB 
ID6142825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp411063 
End bp412037 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content54% 
IMG OID641615294 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001742501 
Protein GI170680798 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT TAATCCAACG CCCTCGTCGC CTGCGCAAAT CTCCTGCGCT GCGCGCTATG 
TTTGAAGAGA CAACACTTAG CCTTAACGAC CTGGTGTTGC CGATCTTTGT TGAAGAAGAA
ATTGACGACT ACAAAGCCGT TGAAGCCATG CCAGGCGTGA TGCGCATTCC AGAGAAACAT
CTGGCACGCG AAATTGAACG TATCGCCAAC GCAGGTATTC GTTCCGTGAT GACTTTCGGC
ATCTCTCACC ATACCGATGA AACCGGCAGC GATGCCTGGC GGGAAGATGG TCTGGTGGCG
CGTATGTCGC GCATCTGCAA GCAGACCGTG CCAGAAATGA TCGTCATGTC AGACACCTGT
TTCTGTGAAT ACACTTCTCA CGGTCACTGC GGTGTGCTGT GCGAGCATGG CGTCGACAAC
GACGCGACCC TGGAAAATTT AGGCAAGCAG GCCGTGGTTG CAGCTGCTGC AGGTGCAGAC
TTCATCGCCC CTTCCGCCGC AATGGATGGC CAGGTACAAG CGATTCGCCA GGCGCTGGAC
GCTGCGGGCT TTAAAGATAC GGCGATTATG TCGTATTCGA CCAAGTTTGC CTCTTCCTTT
TATGGCCCGT TCCGTGAAGC TGCCGGAAGC GCATTAAAAG GCGACCGCAA AAGCTATCAG
ATGAACCCAA TGAACCGTCG TGAGGCGATT CATGAGTCAC TGCTGGATGA AGCCCAGGGC
GCAGACTGCC TGATGGTTAA ACCTGCTGGA GCGTACCTCG ACATCGTGCG TGAGCTGCGT
GAACGTACTG AATTGCCGAT TGGCGCGTAT CAGGTGAGCG GTGAGTATGC GATGATTAAG
TTCGCCGCGC TGGCGGGTGC TATAGATGAA GAGAAAGTTG TGCTCGAAAG CTTAGGTTCG
ATTAAGCGTG CGGGTGCGGA TCTGATTTTC AGCTACTTTG CGCTGGATTT GGCTGAGAAG
AAGATTCTGC GTTAA
 
Protein sequence
MTDLIQRPRR LRKSPALRAM FEETTLSLND LVLPIFVEEE IDDYKAVEAM PGVMRIPEKH 
LAREIERIAN AGIRSVMTFG ISHHTDETGS DAWREDGLVA RMSRICKQTV PEMIVMSDTC
FCEYTSHGHC GVLCEHGVDN DATLENLGKQ AVVAAAAGAD FIAPSAAMDG QVQAIRQALD
AAGFKDTAIM SYSTKFASSF YGPFREAAGS ALKGDRKSYQ MNPMNRREAI HESLLDEAQG
ADCLMVKPAG AYLDIVRELR ERTELPIGAY QVSGEYAMIK FAALAGAIDE EKVVLESLGS
IKRAGADLIF SYFALDLAEK KILR