| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0392 |
|---|
| Symbol | |
|---|
| ID | 6144387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 406321 |
|---|
| End bp | 406992 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641615288 |
|---|
| Product | putative GlcNAc-PI de-N-acetylase |
|---|
| Protein accession | YP_001742495 |
|---|
| Protein GI | 170680287 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.138175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATAAGG TTTTAGATTC AGCCCTCCTT TCTTCGGCAA ATAAAAGAAA GGGTATCCTT
GCTATTGGCG CACATCCTGA CGATATAGAA TTAGGCTGTG GCGCATCGCT TGCTCGTCTT
GCGCAAAAAG GAATTTATAT CGCAGCCGTG GTGATGACTA CCGGCAACTC TGGCACAGAT
GGAATAATCG ATCGCCATGA AGAATCGCGC AACGCCCTAA AGATATTAGG GTGCCACCAA
ACTATTCATC TTAATTTTGC TGACACCCGC GCTCATTTAC AGCTCAATGA TATGATTTCC
GCCCTGGAAG ACATCATTAA AAATCAAATT CCTTCTGATG TTGAAATCAT GCGGGTATAT
ACCATGCATG ATGCTGACCG CCATCAGGAT CATCTTGCAG TCTATCAAGC CTCAATGGTT
GCCTGCCGAA CTATTCCACA AATTCTCGGC TACGAAACCC CAAGTACCTG GCTTTCATTT
ATGCCTCAGG TTTTTGAATC CGTTAAAGAA GAATATTTCA CAGTCAAACT TGCTGCATTA
AAAAAACATA AAAGCCAGGA ACGACGCGAT TATATGCGTC ATGATCGCCT GCGTGCAGTT
GCACAATTTC GCGGGCAACA GGTCAATAGC GATCTGGGTG AAGGCTTTGT AATTCATAAA
ATGATTCTTT GA
|
|---|
| Protein sequence | MDKVLDSALL SSANKRKGIL AIGAHPDDIE LGCGASLARL AQKGIYIAAV VMTTGNSGTD
GIIDRHEESR NALKILGCHQ TIHLNFADTR AHLQLNDMIS ALEDIIKNQI PSDVEIMRVY
TMHDADRHQD HLAVYQASMV ACRTIPQILG YETPSTWLSF MPQVFESVKE EYFTVKLAAL
KKHKSQERRD YMRHDRLRAV AQFRGQQVNS DLGEGFVIHK MIL
|
|---|
| |