| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0384 |
|---|
| Symbol | |
|---|
| ID | 6147081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 399275 |
|---|
| End bp | 400486 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641615280 |
|---|
| Product | putative 3-hydroxyphenylpropionic transporter MhpT |
|---|
| Protein accession | YP_001742487 |
|---|
| Protein GI | 170680668 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACTC GTACCCCTTC ATCATCTTCA TCCCGCCTGA TGCTGACCAT CGGGCTTTGT
TTTTTGGTCG CTCTGATGGA AGGGCTGGAT CTTCAGGCGG CTGGCATTGC GGCGGGTGGC
ATCGCCCAGG CTTTTGCACT CGATAAAATG CAAATGGGCT GGATATTCAG CGCCGGAATA
CTCGGTTTGC TACCCGGCGC GCTGGTTGGC GGGATGCTGG CGGACCGTTA TGGTCGCAAG
CGCATTTTGA TTGGCTCAGT TGCGCTGTTT GGTTTGTTCT CACTGGCAAC GGCGATTGCC
TGGGATTTCC CCTCACTGGT CTTTGCGCGG CTGATGACCG GTGTCGGGCT GGGGGCGGCG
TTGCCGAATC TGATCGCCCT GACGTCTGAA GCCGCGGGTC CACGTTTTCG TGGGACGGCA
GTGAGCCTGA TGTATTGCGG TGTTCCCATT GGCGCGGCGC TGGCGGCGAC ACTGGGTTTC
GCGGGGGCAA ACTTAGCATG GCAAACGGTG TTTTGGGTAG GTGGTGTGGT GCCGTTGATT
CTGGTGCCGC TGTTAATGCG CTGGCTGCCG GAGTCGGCGG TGTTCGCTGG CGAAAAACAG
GCCGCGCCAC CACTGCGTGC GTTATTTGCG CCAGAAACGG CTACCGCGAC GCTGCTGCTG
TGGTTGTGTT ATTTCTTCAC TCTGCTGGTG GTCTACATGT TGATCAACTG GCTACCGCTG
CTTTTGGTGG AGCAAGGATT CCAGCCATCG CAGGCGGCAG GGGTGATGTT TGCACTGCAA
ATGGGGGCGG CAAGCGGGAC GTTAATGTTG GGCGCATTGA TGGATAAGCT GCGTCCAGTA
ACCATGTCGC TACTGATTTA TAGCGGCATG TTAGCTTCGC TGCTGGCGCT GGGAACGGTG
TCGTCATTTA ACGGTATGTT GCTGGCGGGA TTCGTCGCGG GGTTGTTTGC GACAGGTGGG
CAAAGCGTTT TGTATGCCCT GGCACCGTTG TTTTACAGTT CGCAGATCCG CGCAACAGGT
GTGGGAACAG CCGTGGCGGT AGGGCGTCTG GGGGCTATGA GCGGTCCGTT ACTGGCCGGG
AAAATGCTGG CATTAGGCAC TGGCACGGTT GGCGTAATGG CCGCTTCTGC GCCGGGTATT
CTTGTTGCCG GCCTGGCAGT GTTTATTTTG ATGAGCCGGA GATCACGAAT GCAGCCGTGT
GCAGATGCCT GA
|
|---|
| Protein sequence | MSTRTPSSSS SRLMLTIGLC FLVALMEGLD LQAAGIAAGG IAQAFALDKM QMGWIFSAGI
LGLLPGALVG GMLADRYGRK RILIGSVALF GLFSLATAIA WDFPSLVFAR LMTGVGLGAA
LPNLIALTSE AAGPRFRGTA VSLMYCGVPI GAALAATLGF AGANLAWQTV FWVGGVVPLI
LVPLLMRWLP ESAVFAGEKQ AAPPLRALFA PETATATLLL WLCYFFTLLV VYMLINWLPL
LLVEQGFQPS QAAGVMFALQ MGAASGTLML GALMDKLRPV TMSLLIYSGM LASLLALGTV
SSFNGMLLAG FVAGLFATGG QSVLYALAPL FYSSQIRATG VGTAVAVGRL GAMSGPLLAG
KMLALGTGTV GVMAASAPGI LVAGLAVFIL MSRRSRMQPC ADA
|
|---|
| |