Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0381 |
Symbol | mhpD |
ID | 6142755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 396333 |
End bp | 397142 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641615277 |
Product | 2-keto-4-pentenoate hydratase |
Protein accession | YP_001742484 |
Protein GI | 170684013 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.795138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGC ATACTCTTGA GCAACTGGCG GCGGATTTAC GCCGCGCCGC AGAGCAGGGC GAAGCGATTG CGCCGCTGCG CGATCTGATT GGTATCGATA ACGCTGAAGC GGCCTACGCC ATTCAGCACA TCAATGTGCA ACATGACGTC GCGCAGGGGC GTCGCGTGGT GGGGCGTAAA GTGGGGCTGA CGCATCCGAA AGTGCAGCAA CAACTGGGCG TTGATCAACC GGATTTCGGG ACATTATTTG CCGACATGTG TTATGGCGAT AATGAAACCA TTCCTTTTTC CCGTGTTCTG CAACCCCGCA TTGAAGCGGA GATCGCACTG GTGTTGAACC GCGATCTACC CGCAACCGAT ATCACCTTCG ACGAATTGTA TAACGCCATT GAATGGGTAC TTCCGGCGCT GGAGGTGGTG GGGAGCCGCA TTCGCGACTG GTCGATTCAG TTTGTCGATA CCGTGGCAGA TAACGCTTCC TGCGGGGTGT ATGTCATCGG CGGTCCGGCG CAACGCCCGG CGGGGTTAGA CCTGAAAAAC TGCGCCATGA AGATGACGCG TAATAACGAA GAGGTTTCCA GCGGGCGCGG CAGCGAATGC CTGGGACATC CGCTTAATGC CGCCGTCTGG CTGGCACGCA AAATGGCCAG TCTGGGTGAA CCGCTGCGCG CCGGAGATAT CATCCTTACC GGGGCATTAG GTCCGATGGT GGCGGTGAAT GCGGGCGATC GTTTTGAAGC CCATATCGAA GGCATAGGTT CAGTTGCTGC GACATTTTCA AGCGCAGCCC CAAAAGGAAG TCTGTCATGA
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Protein sequence | MTKHTLEQLA ADLRRAAEQG EAIAPLRDLI GIDNAEAAYA IQHINVQHDV AQGRRVVGRK VGLTHPKVQQ QLGVDQPDFG TLFADMCYGD NETIPFSRVL QPRIEAEIAL VLNRDLPATD ITFDELYNAI EWVLPALEVV GSRIRDWSIQ FVDTVADNAS CGVYVIGGPA QRPAGLDLKN CAMKMTRNNE EVSSGRGSEC LGHPLNAAVW LARKMASLGE PLRAGDIILT GALGPMVAVN AGDRFEAHIE GIGSVAATFS SAAPKGSLS
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