| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0375 |
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| Symbol | lacZ |
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| ID | 6144942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 387449 |
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| End bp | 390523 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641615271 |
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| Product | beta-D-galactosidase |
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| Protein accession | YP_001742478 |
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| Protein GI | 170681400 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000167859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGA TTACGGATTC ACTGGCCGTC GTATTACAAC GTCGTGACTG GGAAAACCCT
GGCGTTACCC AACTTAATCG CCTTGCGGCA CATCCCCATT TCGCCAGCTG GCGAAATAGC
GAAGAGGCCC GCACCGATCG CCCTTCCCAA CAGTTGCGCA GCCTGAATGG CGAATGGCGC
TTTGCCTGGT TTCCGGCACC AGAAGCGGTG CCGGAAAGCT GGCTGGATTG CGATCTTCCT
GACGCCGATA CTGTCGTCGT CCCCTCAAAC TGGCAGATGC ACGGTTACGA TGCGCCCATC
TACACCAACG TGACCTATCC CATTACGGTC AATCCGCCTT TTGTTCCCGC GGAGAATCCG
ACGGGTTGTT ACTCGCTCAC ATTTAATATT GATGAATGCT GGCTACAGAA AGGCCAGACG
CGAATTATTT TTGATGGTGT TAACTCGGCG TTTCATCTGT GGTGCAACGG GCGCTGGGTC
GGTTACGGCC AGGACAGCCG TTTGCCGTCT GAATTTGACC TGAGCGCATT TTTACGCGCC
GGAAAAAACC GCCTCGCGGT GATGGTGCTG CGCTGGAGTG ACGGCAGTTA TCTGGAAGAT
CAGGATATGT GGCGGATGAG CGGCATTTTC CGTGACGTCT CGTTGCTGCA CAAACCGACC
ACACAAATCA GCGATTTCCA TGTTGCCACT CGCTTTAATG ATGATTTCAG CCGCGCGGTA
CTGGAGGCAG AAGTTCAGAT GTGCGGCGAA CTGCGCGATG AGCTGCGGGT GACGGTTTCT
TTGTGGCAGG GTGAAACGCA GGTCGCCAGC GGCACCACGC CTTTCGGCGG TGAAATTATC
GATGAGCGTG GTGGTTATGC CGATCGCGTC ACGCTACGTC TGAACGTCGA AAACCCGGCG
CTGTGGAGCG CCGAAATCCC GAATCTCTAT CGTGCGGTGG TTGAACTGCA CACCGCCGAC
GGCACGCTGA TTGAAGCAGA AGCCTGCGAT GTCGGTTTCC GCGAAGTGCG GATTGAAAAT
GGTCTCCTGC TGCTGAACGG CAAGCCGGTG CTGATTCGCG GCGTTAACCG TCACGAGCAT
CATCCTCTGC ATGGTCAGGT CATGGATGAG CAGACGATGG TGCAGGATAT CCTGCTGATG
AAGCAGAACA ACTTTAACGC CGTGCGCTGT TCGCATTATC CGAATCATCC GCTGTGGTAC
ACGTTGTGCG ACCGCTACGG CCTGTATGTG GTGGATGAAG CCAATATTGA AACCCACGGC
ATGGTGCCAA TGAATCGTCT GACCGATGAT CCGCGCTGGC TACCAGCGAT GAGCGAACGC
GTAACGCGAA TGGTGCAGCG CGATCGTAAT CACCCGAGTG TGATCATCTG GTCGCTGGGG
AATGAATCAG GCCACGGCGC TAATCACGAC GCGCTGTATC GCTGGATCAA ATCTGTCGAT
CCTTCCCGCC CGGTGCAGTA TGAAGGCGGC GGAGCCGACA CCACGGCCAC CGATATTATT
TGCCCGATGT ACGCGCGCGT GGATGAAGAC CAGCCCTTCC CGGCTGTGCC GAAATGGTCC
ATCAAAAAAT GGCTTTCGCT GCCTGGAGAA CTGCGCCCGC TGATCCTTTG CGAATATGCC
CACGCGATGG GTAACAGTCT TGGCGGCTTC GCTAAATACT GGCAGGCATT TCGTCAGTAC
CCCCGTTTAC AGGGCGGCTT CGTCTGGGAC TGGGTGGATC AGTCGCTGAT TAAATATGAT
GAAAACGGCA ACCCGTGGTC GGCTTACGGC GGTGATTTTG GCGATACGCC GAACGATCGC
CAGTTCTGCA TGAACGGTCT GGTATTTGCC GACCGCACGC CGCATCCGGC GCTGACGGAA
GCAAAACACC AGCAGCAGTT TTTCCAGTTC CGTTTATCCG GGCGAACCAT CGAAGTGACC
AGCGAATACC TGTTCCGTCA TAGCGATAAC GAGCTCCTGC ACTGGTCGGT GGCACTGGAT
GGCAAGCCGC TGGCAAGCGG TGAAATGCCT CTGGATGTTG CTCCACAAGA TAAACAGTTG
ATTGAACTGC CTGAACTACC GCAGCCGGAA AGCACCGGAC AACTCTGGCT TACGGTACAC
GTAGTGCAAC CGAACGCGAC CGCATGGTCA GAAGCCGGAC ACATTAGCGC CTGGCAGCAG
TGGCGTCTGG CGGAAAACCT CAGTGTGGCA CTCCCCTCCG CGCCCCACGC CATCCCGCAA
CTGACCACCA GCGAAATGGA TTTTTGCATC GAGCTGGGTA ATAAGCGTTG GCAATTTAAC
CGCCAGTCAG GCTTTCTTTC ACAGATGTGG ATTGGCGATG AAAAACAACT GCTGACGCCG
CTGCGCGATC AGTTCATCCG CGCACCGCTG GATAACGACA TTGGCGTAAG TGAAGCGACC
CGCATTGACC CTAACGCCTG GGTCGAACGC TGGAAGGCGG CGGGCCATTA CCAGGCCGAA
GTGGCGTTGT TGCAGTGCAC GGCAGATATA CTTGCCGACG CGGTGCTGAT TACGACCGCT
CACGCGTGGC AGCATCAGGG GAAAACCTTA TTTATCAGCC GGAAAACCTA CCGGATTGAT
GGTAGTGGTC AAATGGCGAT TACCGTTGAT GTTGAAGTGG CGAGCGATAC ACCGCATCCG
GCGCGGATTG GCCTGACCTG CCAGCTGGCG CAGGTCGCAG AGCGGGTAAA CTGGCTCGGA
TTAGGGCCGC AAGAAAACTA TCCCGACCGC CTTACTGCGG CCTGTTTTGA CCGCTGGGAT
CTGCCATTGT CAGACATGTA TACCCCTTAC GTCTTCCCGA GCGAAAACGG TCTGCGCTGC
GGGACGCGCG AATTGAATTA TGGCCCACAC CAGTGGCGCG GCGACTTCCA GTTCAATATC
AGTCGCTACA GCCAACAACA ACTGATGGAA ACCAGCCATC GCCATCTGCT GCACGCGGAA
GAAGGCACAT GGCTGAATAT CGACGGTTTC CATATGGGGA TTGGTGGCGA CGACTCCTGG
AGCCCGTCAG TGTCGGCGGA ATTCCAGCTG AGCGCCGGTC GCTACCATTA CCAGTTGGTC
TGGTGTCAAA AATAA
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| Protein sequence | MTMITDSLAV VLQRRDWENP GVTQLNRLAA HPHFASWRNS EEARTDRPSQ QLRSLNGEWR
FAWFPAPEAV PESWLDCDLP DADTVVVPSN WQMHGYDAPI YTNVTYPITV NPPFVPAENP
TGCYSLTFNI DECWLQKGQT RIIFDGVNSA FHLWCNGRWV GYGQDSRLPS EFDLSAFLRA
GKNRLAVMVL RWSDGSYLED QDMWRMSGIF RDVSLLHKPT TQISDFHVAT RFNDDFSRAV
LEAEVQMCGE LRDELRVTVS LWQGETQVAS GTTPFGGEII DERGGYADRV TLRLNVENPA
LWSAEIPNLY RAVVELHTAD GTLIEAEACD VGFREVRIEN GLLLLNGKPV LIRGVNRHEH
HPLHGQVMDE QTMVQDILLM KQNNFNAVRC SHYPNHPLWY TLCDRYGLYV VDEANIETHG
MVPMNRLTDD PRWLPAMSER VTRMVQRDRN HPSVIIWSLG NESGHGANHD ALYRWIKSVD
PSRPVQYEGG GADTTATDII CPMYARVDED QPFPAVPKWS IKKWLSLPGE LRPLILCEYA
HAMGNSLGGF AKYWQAFRQY PRLQGGFVWD WVDQSLIKYD ENGNPWSAYG GDFGDTPNDR
QFCMNGLVFA DRTPHPALTE AKHQQQFFQF RLSGRTIEVT SEYLFRHSDN ELLHWSVALD
GKPLASGEMP LDVAPQDKQL IELPELPQPE STGQLWLTVH VVQPNATAWS EAGHISAWQQ
WRLAENLSVA LPSAPHAIPQ LTTSEMDFCI ELGNKRWQFN RQSGFLSQMW IGDEKQLLTP
LRDQFIRAPL DNDIGVSEAT RIDPNAWVER WKAAGHYQAE VALLQCTADI LADAVLITTA
HAWQHQGKTL FISRKTYRID GSGQMAITVD VEVASDTPHP ARIGLTCQLA QVAERVNWLG
LGPQENYPDR LTAACFDRWD LPLSDMYTPY VFPSENGLRC GTRELNYGPH QWRGDFQFNI
SRYSQQQLME TSHRHLLHAE EGTWLNIDGF HMGIGGDDSW SPSVSAEFQL SAGRYHYQLV
WCQK
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