Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0374 |
Symbol | lacY |
ID | 6146499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 386144 |
End bp | 387397 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641615270 |
Product | galactoside permease |
Protein accession | YP_001742477 |
Protein GI | 170680767 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.131183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTATT TAAAAAACAC AAACTTTTGG ATGTTCGGTT TATTCTTTTT CTTTTACTTT TTTATCATGG GAGCCTACTT CCCATTTTTC CCGATTTGGC TACATGACAT CAACCATATC AGCAAAAGTG ATACGGGTAT TATTTTTGCT GCTATTTCTC TGTTCTCGCT ATTATTCCAA CCGCTGTTTG GTCTGCTTTC TGACAAACTC GGGCTGCGCA AATACCTGCT GTGGATTATT ACCGGCATGT TAGTGATGTT TGCGCCGTTC TTTATTTTTA TCTTCGGGCC ACTGTTACAA TACAACATTT TAGTAGGATC GATTGTTGGT GGTATTTATC TTGGCTTTTG TTTTAACGCC GGTGCGCCAG CAGTAGAGGC ATTTATCGAG AAAGTCAGCC GTCGCAGTAA TTTCGAATTT GGTCGCGCGC GGATGTTTGG CTGTGTTGGC TGGGCGCTGT GTGCCTCGAT TGTCGGTATC ATGTTCACCA TCAATAATCA GTTTGTTTTC TGGCTGGGTT CTGGCTGTGC ACTCATCCTC GCCGTTTTAC TCTTTTTCGC CAAAACGGAT GCACCCTCTT CCGCCACGGT TGCCAATGCG GTAGGTGCCA ACCATTCGGC ATTTAGCCTT AAGCTGGCGC TGGAACTGTT CAGACAGCCA AAACTGTGGT TTTTGTCACT GTATGTTATT GGCGTTTCCT GCACCTACGA TGTTTTTGAC CAACAGTTTG CTAATTTCTT TACTTCGTTC TTTGCTACCG GTGAACAGGG TACGCGGGTA TTTGGCTACG TAACGACAAT GGGCGAATTA CTTAACGCCT CGATTATGTT CTTTGCGCCA CTGATCATTA ATCGCATCGG TGGGAAAAAC GCCCTACTGC TGGCTGGCAC TATTATGTCT GTACGTATTA TTGGCTCATC GTTCGCCACC TCAGCGCTGG AAGTGGTTAT TCTGAAAACG CTGCATATGT TTGAAGTACC GTTCCTGCTG GTGGGCTGCT TTAAATATAT TACCAGCCAG TTTGAAGTGC GTTTTTCAGC GACGATTTAT CTGGTCTGTT TCTGCTTCTT TAAGCAACTG GCGATGATTT TTATGTCTGT ACTGGCGGGC AATATGTATG AAAGCATCGG TTTCCAGGGC GCTTATCTGG TGCTGGGTCT GGTGGCGTTG GGCTTCACCT TAATTTCCGT GTTCACGCTT AGCGGCCCCG GTCCGCTTTC TCTACTGCGT CGTCAGGTGA ATGAAGTCGC TTAA
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Protein sequence | MYYLKNTNFW MFGLFFFFYF FIMGAYFPFF PIWLHDINHI SKSDTGIIFA AISLFSLLFQ PLFGLLSDKL GLRKYLLWII TGMLVMFAPF FIFIFGPLLQ YNILVGSIVG GIYLGFCFNA GAPAVEAFIE KVSRRSNFEF GRARMFGCVG WALCASIVGI MFTINNQFVF WLGSGCALIL AVLLFFAKTD APSSATVANA VGANHSAFSL KLALELFRQP KLWFLSLYVI GVSCTYDVFD QQFANFFTSF FATGEQGTRV FGYVTTMGEL LNASIMFFAP LIINRIGGKN ALLLAGTIMS VRIIGSSFAT SALEVVILKT LHMFEVPFLL VGCFKYITSQ FEVRFSATIY LVCFCFFKQL AMIFMSVLAG NMYESIGFQG AYLVLGLVAL GFTLISVFTL SGPGPLSLLR RQVNEVA
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