| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0364 |
|---|
| Symbol | prpC |
|---|
| ID | 6144059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 374541 |
|---|
| End bp | 375710 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641615260 |
|---|
| Product | methylcitrate synthase |
|---|
| Protein accession | YP_001742467 |
|---|
| Protein GI | 170680874 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CAACGATCCT GCAAAACAGT ACCCATGTCA TTAAACCGAA AAAATCGGTG
GCGCTTTCTG GCGTTCCGGC GGGCAATACA GCGCTCTGCA CCGTGGGTAA AAGCGGCAAT
GATTTGCATT ACCGCGGCTA CGACATTCTT GATCTGGCGG AACATTGCGA ATTTGAAGAA
GTAGCGCATC TGCTGATCCA CGGCAAACTG CCGACCCGTG ACGAACTCGC CGCCTACAAA
ACGAAACTGA AAGCCCTGCG CGGTTTACCG GCTAACGTGC GTACCGTGCT GGAAGCCTTA
CCGGCGGCGT CACACCCGAT GGATGTTATG CGCACCGGCG TTTCCGCGCT CGGCTGCACG
CTGCCAGAAA AAGAGGGGCA TACCGTCTCC GGCGCGCGTG ATATTGCCGA CAAACTGTTG
GCGTCGCTGA GCTCGATTCT TCTCTACTGG TATCACTACA GCCACAACGG CGAACGCATC
CAGCCGGAAA CCGATGACGA TTCTATAGGC GGTCATTTCC TGCATCTGCT GCATGGTGAA
AAGCCGTCGC AAAGCTGGGA AAAGGCGATG CATATTTCGC TGGTGCTGTA CGCCGAACAC
GAGTTTAACG CCTCCACCTT TACCAGCCGG GTGATTGCGG GCACCGGCTC TGACATGTAT
TCAGCGATTA TCGGCGCGAT TGGCGCACTG CGCGGGCCGA AACACGGCGG GGCGAATGAA
GTGTCGCTGG AGATCCAGCA ACGTTACGAA ACGCCGGACG AAGCCGAAGC CGATATCCGC
AAGCGCGTGG AAAACAAAGA AGTGGTGATT GGTTTTGGAC ATCCGGTTTA TACCATCGCT
GACCCGCGTC ATCAGGTGAT CAAACGCGTG GCGAAGCAGC TCTCGCAGGA AGGCGGCTCG
CTGAAGATGT ACAACATCGC CGATCGCCTG GAAACGGTGA TGTGGGAGAG CAAAAAGATG
TTCCCCAATC TCGACTGGTT CTCCGCTGTT TCCTACAAAA TGATGGGCGT TCCCACCGAG
ATGTTCACAC CACTGTTTGT TATCGCCCGC GTCACCGGCT GGGCGGCGCA CATTATCGAA
CAACGTCAGG ACAACAAAAT TATCCGTCCT TCCGCCAATT ATGTTGGACC GGAAGACCGC
CAGTTTGTCG CGCTGGATAA GCGCCAGTAA
|
|---|
| Protein sequence | MSDTTILQNS THVIKPKKSV ALSGVPAGNT ALCTVGKSGN DLHYRGYDIL DLAEHCEFEE
VAHLLIHGKL PTRDELAAYK TKLKALRGLP ANVRTVLEAL PAASHPMDVM RTGVSALGCT
LPEKEGHTVS GARDIADKLL ASLSSILLYW YHYSHNGERI QPETDDDSIG GHFLHLLHGE
KPSQSWEKAM HISLVLYAEH EFNASTFTSR VIAGTGSDMY SAIIGAIGAL RGPKHGGANE
VSLEIQQRYE TPDEAEADIR KRVENKEVVI GFGHPVYTIA DPRHQVIKRV AKQLSQEGGS
LKMYNIADRL ETVMWESKKM FPNLDWFSAV SYKMMGVPTE MFTPLFVIAR VTGWAAHIIE
QRQDNKIIRP SANYVGPEDR QFVALDKRQ
|
|---|
| |