| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0361 |
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| Symbol | prpR |
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| ID | 6143945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 371781 |
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| End bp | 373367 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641615258 |
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| Product | propionate catabolism operon regulatory protein PrpR |
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| Protein accession | YP_001742465 |
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| Protein GI | 170684111 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.785854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACATC CACCACGGCT GAATGACGAC AAACCGGTTA TCTGGACAGT ATCGGTGACG
CGCCTGTTCG AGCTGTTTCG CGATATCAGC CTCGAGTTTG ATCACCTGGC GAATATCACC
CCTATTCAGC TTGGCTTTGA AAAAGCGGTG ACCTACATCC GCAAGAAACT GGCAAACGAA
CGCTGCGATG CCATCATCGC TGCTGGCTCT AACGGCGCGT ACCTGAAAAG CCGCCTGTCA
GTGCCAGTTA TTTTGATTAA ACCGAGCGGC TACGATGTAT TACAGGCACT GGCAAAAGCC
GGAAAACTCA CCTCTTCTAT CGGCGTTGTC ACTTATCAGG AAACTATTCC GGCACTGGTG
GCGTTTCAAA AAACCTTTAA TTTGCGCCTC GACCAACGTA GCTACATTAC CGAAGAAGAC
GCGCGCGGGC AGATTAACGA GCTGAAAGCT AACGGCACCG AAGCGGTGGT CGGCGCGGGG
CTGATTACCG ATCTGGCAGA AGAAGCCGGA ATGACCGGAA TTTTTATCTA TTCCGCCGCC
ACCGTACGCC AGGCATTCAG CGATGCGCTG GATATGACGC GCATGTCGTT ACGCCATAAC
ACTCACGATG CCACCCGCAA CGCCCTGCGT ACTCGTTACG TGCTGGGCGA TATGCTCGGT
CAATCACCAC AGATGGAACA GGTACGGCAG ACTATTTTGC TGTATGCCCG CTCCAGTGCG
GCGGTGTTGA TTGAGGGGGA AACGGGGACG GGCAAAGAGC TGGCGGCCCA GGCGATTCAT
CGGGAATATT TTGCCCGCCA CGATGCGCGA CAGGGCAAAA AGTCGCATCC GTTTGTTGCC
GTCAACTGCG GGGCGATTGC TGAATCTCTG CTGGAAGCGG AGCTGTTTGG CTATGAGGAA
GGAGCGTTTA CCGGCTCGCG ACGTGGAGGT CGCGCCGGGC TGTTCGAAAT TGCCCACGGC
GGTACGCTGT TTCTGGATGA GATTGGCGAA ATGCCGCTAC CTTTGCAGAC TCGCCTGTTA
CGGGTGCTGG AAGAAAAAGA GGTCACCCGC GTCGGCGGGC ATCAGCCTGT TCCGGTGGAT
GTGCGAGTCA TTAGCGCCAC TCACTGCAAT CTGGAAGAAG ATATGCGGCA AGGGGAGTTT
CGCCGTGATC TGTTTTATCG GCTGAGTATT TTGCGTCTGC AATTGCCACC ACTGCGCGAG
CGGGTGACGG ATATTCTGCC GCTGGCGGAA AGCTTTTTGA AAGTGTCTCT GGCGGCGCTC
TCCGCCCCGT TTTCTGCCGC ATTACGCCAG GGGTTACAGG CAAGCGAAAC CGTGCTGGTG
CACTACGACT GGCCGGGCAA TATTCGTGAA CTGCGCAATA TGATGGAGCG ACTGGCGCTG
TTTTTAAGTG TGGAACCGAC GCCGGATTTA ACGCCGCAAT TTTTGCAGCT GCTACTGCCG
GAACTGGCGC GCGAGTCGGC GAAAACTCCC GCTCCACGCT TACTGACACC ACAACAGGCA
CTGGAGAAAT TTAATGGCGA TAAAACAGCA GCGGCGAATT ATTTAGGTAT CAGCCGGACG
ACGTTCTGGC GGCGGCTGAA AAGCTGA
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| Protein sequence | MAHPPRLNDD KPVIWTVSVT RLFELFRDIS LEFDHLANIT PIQLGFEKAV TYIRKKLANE
RCDAIIAAGS NGAYLKSRLS VPVILIKPSG YDVLQALAKA GKLTSSIGVV TYQETIPALV
AFQKTFNLRL DQRSYITEED ARGQINELKA NGTEAVVGAG LITDLAEEAG MTGIFIYSAA
TVRQAFSDAL DMTRMSLRHN THDATRNALR TRYVLGDMLG QSPQMEQVRQ TILLYARSSA
AVLIEGETGT GKELAAQAIH REYFARHDAR QGKKSHPFVA VNCGAIAESL LEAELFGYEE
GAFTGSRRGG RAGLFEIAHG GTLFLDEIGE MPLPLQTRLL RVLEEKEVTR VGGHQPVPVD
VRVISATHCN LEEDMRQGEF RRDLFYRLSI LRLQLPPLRE RVTDILPLAE SFLKVSLAAL
SAPFSAALRQ GLQASETVLV HYDWPGNIRE LRNMMERLAL FLSVEPTPDL TPQFLQLLLP
ELARESAKTP APRLLTPQQA LEKFNGDKTA AANYLGISRT TFWRRLKS
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