| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0356 |
|---|
| Symbol | |
|---|
| ID | 6144238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 367804 |
|---|
| End bp | 368853 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641615252 |
|---|
| Product | zinc-binding dehydrogenase family oxidoreductase |
|---|
| Protein accession | YP_001742460 |
|---|
| Protein GI | 170680738 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.799512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA AAGCTGTTGG TGCATATTCC GCTAAACAAC CGCTGGAACC GATGGATATC
ACCCGGCGTG AACCGGGACC GCATGATGTC AAAATCGAAA TCGCTTACTG TGGCGTCTGC
CATTCCGATA TCCACCAGGT CCGTTCCGAG TGGGCGGGGA CGGTTTACCC CTGTGTGCCG
GGTCATGAAA TTGTGGGGCG TGTGGTAGCC GTTGGTGATC AGGTAGAAAA ACATGCGCCG
GGCGATCTGG TCGGTGTCGG CTGCATTGTC GACAGTTGTA AACATTGCGA AGAGTGTGAA
GACGGGCTGG AAAACTACTG TGATCACATG ACCGGCACCT ATAACTCGCC GACGCCGGAC
GAACCGGGCC ATACTCTGGG CGGCTACTCA CAACAGATCG TCGTTCATGA GCGATATGTT
CTGCGTATTC GTCACCCGCA AGAGCAGCTG GCGGCGGTGG CACCTTTGTT GTGTGCAGGG
ATCACCACGT ATTCGCCGCT ACGTCACTGG CAGGCCGGGC CGGGAAAAAA AGTGGGCGTG
GTCGGCATCG GCGGTCTGGG ACATATGGGG ATTAAGCTGG CCCACGCGAT GGGGGCGCAT
GTGGTGGCAT TTACCACTTC TGAGGCAAAA CGCGAAGCGG CAAAAGCCCT GGGGGCCGAT
GAAGTTGTTA ACTCACGCAA TGCCGATGAG ATGGCGGCTC ATCTCAAGAG TTTCGATTTC
ATTTTGAATA CAGTAGCTGC GCCACATAAT CTCGACGATT TTACCACCTT GCTGAAGCGT
GATGGCACCA TGACGCTGGT TGGTGCGCCT GCGACACCGC ATAAATCACC GGAAGTTTTC
AACCTGATCA TGAAACGCCG TGCGATAGCC GGCTCTATGA TTGGCGGCAT TCCAGAAACA
CAGGAGATGC TCGATTTTTG CGCCGAACAT GACATCGTGG CTGATATAGA GATGATTCGG
GCCGATCAAA TTAATGAAGC CTATGAGCGA ATGCTGCGAG GTGATGTGAA ATATCGTTTT
GTTATCGATA ATCGCACACT AACAGACTGA
|
|---|
| Protein sequence | MKIKAVGAYS AKQPLEPMDI TRREPGPHDV KIEIAYCGVC HSDIHQVRSE WAGTVYPCVP
GHEIVGRVVA VGDQVEKHAP GDLVGVGCIV DSCKHCEECE DGLENYCDHM TGTYNSPTPD
EPGHTLGGYS QQIVVHERYV LRIRHPQEQL AAVAPLLCAG ITTYSPLRHW QAGPGKKVGV
VGIGGLGHMG IKLAHAMGAH VVAFTTSEAK REAAKALGAD EVVNSRNADE MAAHLKSFDF
ILNTVAAPHN LDDFTTLLKR DGTMTLVGAP ATPHKSPEVF NLIMKRRAIA GSMIGGIPET
QEMLDFCAEH DIVADIEMIR ADQINEAYER MLRGDVKYRF VIDNRTLTD
|
|---|
| |