| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0336 |
|---|
| Symbol | |
|---|
| ID | 6147070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 344496 |
|---|
| End bp | 345821 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641615232 |
|---|
| Product | pyridine nucleotide-disulfide oxidoreductase |
|---|
| Protein accession | YP_001742440 |
|---|
| Protein GI | 170680932 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT ATCAGGCAGT TATTATTGGT TTTGGCAAGG CTGGAAAAAC ATTAGCCGTC
ACGCTGGCAA AAGCAGGTTG GCGTGTGGCT CTCATCGAAC AATCAAATGC AATGTATGGC
GGGACCTGTA TTAATATCGG CTGTATCCCA ACCAAAACAT TGGTTCATGA CGCACAGCAG
CACACAGATT TTGTCCGTGC CATACAGCGT AAAAATGAAG TGGTTAATTT TTTACGTAAT
AAGAATTTTC ATAATCTTGC GGATATGCCC AATATCGACG TGATCGACGG CCAGGCGGAG
TTTATCAATA ATCATAGCCT GCGTGTTCAT CGGCCTGAGG GAAATCAGGA GATTCATGGC
GAGAAAATTT TTATTAATAC CGGTGCACAA ACCGTGGTTC CGCCAATTCC TGGAATTACC
ACCACGCCTG GTGTATATGA CAGCACCGGA TTACTTAATC TAAAAGAATT GCCTGCACAT
TTAGGTATTT TGGGCGGCGG ATATATTGGC GTTGAGTTCG CCTCTATATT CGCTAATTTT
GGCAGCAAAG TAACCATTTT AGAGGCAGCT TCGCTGTTTT TGCCTCGGGA AGATCGGGAT
ATTGCTGATA ATATCGCGAC GATTTTACGC GATCAGGGCG TCGATATAAT CCTCAATGCC
CATGTGGAGC GAATCAGTCA CCATGAAAAT CAAGTGCAAG TGCATAGCGA GCACGCCCAA
CTGGCGGTGG ATGCACTGTT AATAGCTTCC GGTCGTCAAC CGGCTACCGC TTCGTTACAT
CCAGAAAATG CAGGTATCGC AGTAAACGAG CGCGGGGCAA TTGTCGTTGA CAAGCAATTA
CATACCACCG CAAACAATAT TTGGGCGATG GGAGATGTTA CCGGCGGGCT GCAATTTACT
TACATTTCAC TGGATGATTA CCGCATTGTG CGTGATGAAT TGCTGGGAGA AGGCAGACGT
AGTACTGATG ATCGGAAAAA TGTGCCTTAT TCCGTATTCA TGACACCGCC ACTGTCCAGG
GTTGGTATGA CAGAAGAACA GGCCAGAGAG AGTGGTGCTG ATATTCAGGT GGTGACATTG
CCTGTAGCTG CAATTCCGCG TGCCAGAGTG ATGAATGATA CTCGTGGGGT ATTAAAAGCG
ATTGTTGATA ATAAAACCCA ACGTATATTA GGGGCATCAC TGCTGTGTGT TGACTCCCAC
GAGATGATCA ATATAGTGAA AATGGTGATG GATGCCGGGC TGCCTTATAG CATATTACGC
GATCAGATAT TTACTCATCC GTCGATGAGC GAATCACTCA ATGATCTATT TTCATTAGTC
AAATAA
|
|---|
| Protein sequence | MNKYQAVIIG FGKAGKTLAV TLAKAGWRVA LIEQSNAMYG GTCINIGCIP TKTLVHDAQQ
HTDFVRAIQR KNEVVNFLRN KNFHNLADMP NIDVIDGQAE FINNHSLRVH RPEGNQEIHG
EKIFINTGAQ TVVPPIPGIT TTPGVYDSTG LLNLKELPAH LGILGGGYIG VEFASIFANF
GSKVTILEAA SLFLPREDRD IADNIATILR DQGVDIILNA HVERISHHEN QVQVHSEHAQ
LAVDALLIAS GRQPATASLH PENAGIAVNE RGAIVVDKQL HTTANNIWAM GDVTGGLQFT
YISLDDYRIV RDELLGEGRR STDDRKNVPY SVFMTPPLSR VGMTEEQARE SGADIQVVTL
PVAAIPRARV MNDTRGVLKA IVDNKTQRIL GASLLCVDSH EMINIVKMVM DAGLPYSILR
DQIFTHPSMS ESLNDLFSLV K
|
|---|
| |