Gene EcSMS35_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0334 
Symbol 
ID6143185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp343546 
End bp344139 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID641615230 
Producthypothetical protein 
Protein accessionYP_001742438 
Protein GI170681931 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAT ACCTGCACCT GTTAAGTCGG GGAGATAAAA TTGGCCTGAC ATTGATTCGT 
CTGAGTATTG CGATTGTTTT TATGTGGATT GGGTTATTAA AGTTTGTCCC TTATGAGGCA
GACAGCATTA CACCATTCGT CGCAAACAGT CCACTAATGT CGTTCTTTTA TGAACACCCA
GAAGACTATA AACAGTATCT GACTCACGAA GGCGAATACA AACCAGAAGC AAGAGCATGG
CAAACGGCTA ATAATACCTA TGGTTTTTCC AACGGTCTTG GCGTCGTGGA GGTGATTATT
GCTCTGCTGG TTTTGGCTAA TCCTGTCAAT CGCTGGTTAG GTTTATTGGG TGGGCTGATG
GCATTTACCA CGCCGCTGGT AACACTCTCA TTTTTAATCA CCACTCCGGA AGCATGGGTA
CCCGCATTGG GTGATGCTCA TCATGGTTTC CCTTATTTAT CCGGTGCTGG TCGTCTGGTA
TTGAAAGATA CTCTGATGCT GGCAGGAGCT GTCATGATAA TGGCAGATTC GGCGCGGGAC
ATTCTTAAAC AACGCAGTAA TGAATCCAGT TCAACGTTAA AAACTGAATA TTGA
 
Protein sequence
MEKYLHLLSR GDKIGLTLIR LSIAIVFMWI GLLKFVPYEA DSITPFVANS PLMSFFYEHP 
EDYKQYLTHE GEYKPEARAW QTANNTYGFS NGLGVVEVII ALLVLANPVN RWLGLLGGLM
AFTTPLVTLS FLITTPEAWV PALGDAHHGF PYLSGAGRLV LKDTLMLAGA VMIMADSARD
ILKQRSNESS STLKTEY