Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0326 |
Symbol | |
ID | 6144914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 331476 |
End bp | 332396 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641615222 |
Product | hypothetical protein |
Protein accession | YP_001742430 |
Protein GI | 170680060 |
COG category | [R] General function prediction only |
COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0290065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.299991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG TTTCGATAAA ACACACTTAC TGGGATATAG CTGCTGATAT CTATTTCCCT GACGATTTTA ATAGTGAAAA AAAGTATCCT GCCATTATCA GTGCCCATCC AATTGGAAGC TGCAAAGAAC AGACATCGGG TAGTGTGTAT GGTGCCGCCC TGGCAAAAGC TGGCTTTATC GTCATTGCTT TTGATGCCAG TTTTCAGGGA AGCAGCGGTG GAGAACCGCG TTATCTGGAA GATCCAACAA TGCGAGTAAA AGACTTCAGC ATTGTCGTTG ATTACCTTAC TACCTTACCT TACGTTGATG CCGGGCGTAT TGGTGTACTG GGTATTTGTG GTGGAGGTGG ATATGCCATT AATGCCGCAA TGACAGAACG TCGGATTAAA GCCATTGGTA CTGTCACGGG TGCAAACTAC GGGCGTCTTA TGCGTGAGGG ATTTACAGCG TTTAATCCTA TCGGAGCACT CGAAGCAATG GCGCAACAAA GAACAGACGA AGCTAACGGC GCAAAACTTC GCGTAGATGA TTTGCTCCCT TCTTCTCCGG AAGCAGCTCT TGAAGCGGGA TTAACAGAAA TAGACCTTTT TGAAGCAACA GAATATTATC GTTCGCCACG AGGCTGTGCG CCTAATGGGG TAAATCGTTC GCTATTTTCA CATCAGACTG TTGCCGTGGG CTGGGATGCT TTTCATCTTG CAGAAGTCCT GTTAACTCAA CCACTAATGG TTGTAGTGGG CGATAGAGTG GGCGCTTTTG GTGCCTATCG TGACGGCTGC GAAATTATTG GCCGCGCTGC CTCAAAACAT AAAGAGCTGG TCGTGGTTGA AGGTTATTCA CATTACGACC TGTATGATAA GCCAGAACCT GTGAAACAGG CACTCGACAA ATTAATTCCT TTTTATAAAA CACATTTGTA A
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Protein sequence | MKTVSIKHTY WDIAADIYFP DDFNSEKKYP AIISAHPIGS CKEQTSGSVY GAALAKAGFI VIAFDASFQG SSGGEPRYLE DPTMRVKDFS IVVDYLTTLP YVDAGRIGVL GICGGGGYAI NAAMTERRIK AIGTVTGANY GRLMREGFTA FNPIGALEAM AQQRTDEANG AKLRVDDLLP SSPEAALEAG LTEIDLFEAT EYYRSPRGCA PNGVNRSLFS HQTVAVGWDA FHLAEVLLTQ PLMVVVGDRV GAFGAYRDGC EIIGRAASKH KELVVVEGYS HYDLYDKPEP VKQALDKLIP FYKTHL
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