Gene EcSMS35_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0295 
SymbolphoE 
ID6144995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp302813 
End bp303868 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content45% 
IMG OID641615192 
Productouter membrane phosphoporin protein E 
Protein accessionYP_001742401 
Protein GI170681243 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00372368 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGA GCACTCTGGC ATTAGTGGTG ATGGGCATTG TGGCATCGGC ATCCGTACAG 
GCCGCAGAAA TATATAACAA AGACGGTAAT AAACTGGATA TCTATGGCAA AGTTAAAGCC
ATGCATTATA TGAGCGATAA TGACAGTAAA GATGGCGACC AAAGTTATAT CCGTTTTGGT
TTTAAAGGCG AAACACAAAT TAACGATCAA CTGACGGGTT ATGGTCGGTG GGAAGCAGAG
TTTGCCGGTA ATAAAGCGGA GAGTGATACT GCACAGCAAA AAACGCGTCT CGCTTTTGCC
GGGTTGAAAT ATAAAGATTT GGGTTCTTTC GATTATGGTC GTAACCTGGG CGCGCTGTAT
GACGTGGAAG CCTGGACCGA TATGTTCCCG GAATTTGGTG GCGACTCCTC CGCACAGACC
GACAACTTTA TGACCAAACG TGCCAGCGGT CTGGCGACGT ATAGGAACAC CGACTTCTTC
GGCGTTATCG ATGGTCTGAA CTTAACCCTG CAATATCAAG GGAAAAACGA AAACCGCGAT
GTTAAAAAGC AAAACGGCGA TGGCTTCGGC ACATCATTGA CATATGACTT TGGTGGCAGC
GATTTCGCCA TCAGTGGAGC CTATACCAAC TCTGATCGCA CCAACGAGCA GAACCTGCAA
AGCCGTGGCA CAGGCAAGCG TGCAGAAGCA TGGGCAACAG GTCTGAAATA CGATGCCAAT
AATATTTATC TGGCAACTTT CTATTCTGAA ACACGCAAAA TGACGCCAAT AACTGGCGGC
TTTGCCAATA AGACACAGAA CTTTGAAGCG GTCGCCCAAT ACCAGTTTGA CTTTGGTCTG
CGTCCGTCGC TGGGTTATGT CTTATCGAAA GGGAAAGATA TTGAAGGCAT CGGTGATGAA
GATCTGGTCA ATTATATCGA TGTTGGTGCT ACGTATTATT TCAACAAAAA TATGTCGGCA
TTTGTTGATT ATAAAATAAA CCAACTGGAT AGCGATAATA AGCTGAACAT CAATAATGAT
GATATTGTCG CGGTTGGCAT GACCTATCAG TTTTAA
 
Protein sequence
MKKSTLALVV MGIVASASVQ AAEIYNKDGN KLDIYGKVKA MHYMSDNDSK DGDQSYIRFG 
FKGETQINDQ LTGYGRWEAE FAGNKAESDT AQQKTRLAFA GLKYKDLGSF DYGRNLGALY
DVEAWTDMFP EFGGDSSAQT DNFMTKRASG LATYRNTDFF GVIDGLNLTL QYQGKNENRD
VKKQNGDGFG TSLTYDFGGS DFAISGAYTN SDRTNEQNLQ SRGTGKRAEA WATGLKYDAN
NIYLATFYSE TRKMTPITGG FANKTQNFEA VAQYQFDFGL RPSLGYVLSK GKDIEGIGDE
DLVNYIDVGA TYYFNKNMSA FVDYKINQLD SDNKLNINND DIVAVGMTYQ F