Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0283 |
Symbol | lafT |
ID | 6147126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 292681 |
End bp | 293544 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641615181 |
Product | flagellar motor protein MotA |
Protein accession | YP_001742390 |
Protein GI | 170681048 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0606654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.545308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAA TATTAGGTTT ACTGGTGGTG CTCGGCTGCG TATTTGGCGG TTATTTTGAA GCGGGCGGGC AATTAGTGGC TATCTGGCAA CCGGCGGAAA TGATCATTAT TTTGGGTGCG GGTTTCGGGG CGATGATTAT TGGGAACCCG AAACATGTGC TGAAAGAGAT TGCCCATCAA ATTAAAGGCG TGATCAGTAA AAAACAGCTC GGGCCGGAGT TTCAGCGCCA GCTATTAATG TGCCTGTATG AGTTGCTTGA AATGGTACAA AACGGCGGTC TGCGGATGTT GGATCAGCAT ATTGAGCAGC CGGAAGAGAG TACCGTTTTC CAGAAATACC CGCTGGTGTT AACCCAGAAG CGGCTGGTGA CTTTTATTGC CGATAACTTT CGCCTGATGG CGATGGGTAA AATCGACGCC CATGAACTGG AAGGCATTCT CGATCAGGAG CTGGACACCG CTGAAGAGTC GCTGTTAACG CCGTCACGCT CGCTGCAACG GACCGCCGAA GCGATGCCGG GATTTGGTAT TTGCGCGGCG GTGCTGGGCA TCATCATCAC CATGCAGTCA ATTGACGGTT CTATCGCCCT GATTGGCCTG AAAGTGGCGG CAGCGCTGGT GGGGACATTT TTAGGCGTGT TTATTTGCTA CTGCCTGATG GACCCGCTCG CCAACGCCAT GGAACAGCAG GCGCGGGCGG AACATTCGCT GCTGGAGTGT GTGCGTACCG TGCTGGTGGC CCAGGCGGGC GGCAAACCGA CGCTGTTGGC GGTGGACGCC GGGCGTAAGT TGCTGCATCT GGCGTCCAAA CCGACGTTCG CCAACCTCGA CGCGTGGGTG AATGCGATGC TGGAGCAAGA ATAA
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Protein sequence | MQKILGLLVV LGCVFGGYFE AGGQLVAIWQ PAEMIIILGA GFGAMIIGNP KHVLKEIAHQ IKGVISKKQL GPEFQRQLLM CLYELLEMVQ NGGLRMLDQH IEQPEESTVF QKYPLVLTQK RLVTFIADNF RLMAMGKIDA HELEGILDQE LDTAEESLLT PSRSLQRTAE AMPGFGICAA VLGIIITMQS IDGSIALIGL KVAAALVGTF LGVFICYCLM DPLANAMEQQ ARAEHSLLEC VRTVLVAQAG GKPTLLAVDA GRKLLHLASK PTFANLDAWV NAMLEQE
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