| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0275 |
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| Symbol | lafZ |
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| ID | 6146164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 285900 |
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| End bp | 286793 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641615173 |
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| Product | lateral flagellar transmembrane regulator LafZ |
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| Protein accession | YP_001742382 |
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| Protein GI | 170682839 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.103038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.578449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA CTATCAGGAA ACATTTATCC CTTGCTAAGG TAAACTCAAC TATGAGTATT
ATTATCAACA ACTGGCGGAT GGACCCGTCG CTTAATGCCT TAATACATTG CGAAACGGGT
GAAACACGTC GTCTCGGCGA ATACCATTTT ATTTTGCTGG AAACATTAGC AAAAAATGCC
GATGTGGTTT TATCGCGATC TTATTTATGT GCCGAAGTAT GGAAGAACCG CATAGTCGGC
GGTAACAGCC TGCCGACGGC GATCCATGCG TTGCGCGTTG CTATCGACGA TGATGGCAAA
CAACAGAACA TTATTAAAAC AATTCCGAAG AAAGGTTACT TGTGCAATAA AGAGTATGTG
TCTTTGCCGG AGTCATCGCC TGCAGAAGCG CTGATTATTA CCGACCAGAT ACAAGATACA
GCCCCAGAAG AGATATCTTC GACAACACCG CCTGTACCTG TTAGAAAAAA ACATAAAGGA
CTGATGGGGT TAGCGTTGAC CGCGGCTGTT ATATTTATTG GCTCGACCGT GGGGTATTCA
CACTTGAAAA GTACACCTGA CGCCCCGCAA CTGGTAAAAG AGTCAATTAA CAGTCCAAGA
ATAAAAATAT TTCATCTTAG TTCTGGAAAG GAAAATAATT CCGTACCGTT ACTGTCACAA
ACCCTCGAAC CAGGAAAAGA CAAACTCGAT AATTTATTGT CAGCGCATAA TATGACAATG
ACAACCTATT ATAAATATGT TCGTAACCGA CTGGAAAGCG ATATTGTTCT GCGTAACCAG
TGCAACGGCA GCTGGCAATT AACCTTTAAT GTGGAAGGTT GGCAGAACAG CGATATTAAT
AGCGCGATGT ATCAGAATTT GGAGAAGTTG TTAAATACTG TGCAGAAATG CTGA
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| Protein sequence | MQSTIRKHLS LAKVNSTMSI IINNWRMDPS LNALIHCETG ETRRLGEYHF ILLETLAKNA
DVVLSRSYLC AEVWKNRIVG GNSLPTAIHA LRVAIDDDGK QQNIIKTIPK KGYLCNKEYV
SLPESSPAEA LIITDQIQDT APEEISSTTP PVPVRKKHKG LMGLALTAAV IFIGSTVGYS
HLKSTPDAPQ LVKESINSPR IKIFHLSSGK ENNSVPLLSQ TLEPGKDKLD NLLSAHNMTM
TTYYKYVRNR LESDIVLRNQ CNGSWQLTFN VEGWQNSDIN SAMYQNLEKL LNTVQKC
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