Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0272 |
Symbol | lfgK |
ID | 6143853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 282527 |
End bp | 283903 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641615170 |
Product | lateral flagellar hook associated protein 1 |
Protein accession | YP_001742379 |
Protein GI | 170680262 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.508781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGA TTAACATCGG CTACAGCGGC GCATCAACCG CGCAGGTAGA GCTGAACGTC ACGGCGCAAA ACACCGCCAA CGCCATGACC ACGGGCTACA CCCGTCAGGT GGCGGAGATC AGCACCATCG GCGCCAGCGG TGGTTCGCCG AACAGCGCCG GTAACGGCGT GCAGGTCGAC AGCATTCGCC GCGTCTCTAA CCAGTATCAG GTGAATCAGG TGTGGTATGC CGCCAGCGAT TACGGCTATT ACAGCACCCA GCAGGGGTAT CTCACGCAAC TGGAAGCGGT ACTGAGCGAC GATAACAGCA GCCTGAGCGG CGGCTTCGAT AACTTCTTCG CCGCCCTCAA CGAAGCGACC ACCAGCCCCG ATGATTCCGC CCTGCGCGAA CAGGTGATCA GCGAAGCCGG GGCGCTGTCG TTGCGTATCG ACAACACGCT GGATTACATC GACTCGCAAA GCACGGAAAT CATCAGCCAG CAGCAGGCAA TGGTGTCGCA AATCAACACG CTTACCAGCG GCATCGCCAG CTATAACCAG CAAATCGCCC AGGCCGAAGC CAACGGCGAT AACGCCTCCG CGCTGTACGA CGCCCGCGAT CAGATGGTGG AAGAACTGAG CGGGATGATG GATGTGCAGG TCAATATCGA CGACCAGGGC AACTACAACG TCACCCTGAA AAACGGTCAA CCGCTGGTGA GCGGGCAGCA AAGCTCGACC ATCGCGCTGG AAACCAACGC CGATGGCACG CCGACCATGT CGCTGACTTT CGCTGGCACC ACCTCGACGA TGACTACCGA CACCGGCGGT TCATTAGGCG CACTGTTTGA TTATCAAAAC GACGTGCTGA CGCCGCTGAC CGACACCATC AACAGCATGG CGTTGCAGTT TGCCGATGCG GTCAACAACC AGCTGGCGCA GGGCTACGAT CTCAACGGTA ACCCCGGCGA GCCGCTGTTT ATTTATGACG CCAGCAACGC CGATGGCCCG CTGACCGTTA ACCCGGATAT CACCGCCGAT GAGCTGGCGT TCTCCAGTTC GCCGGATGAA AGCGGTAACA GCGACAACCT TCAGGCGCTG ATCAACATCT CCACCGAACC GCTGGAGATA GCCAACCTTG GCAGCGTGAC GGTCGGGCAG GCGTGCTCGT CGATCATCAG CAACATCGGC ATTTACAGCC AGCAAAACCA GACGGAAGTC GATGCCGCGT CCAATGTTTA TTCTGAGGCG CAAAACCAGC AGAGCAGCGT CAGCGGCGTC AGCATGGACG AAGAAGCGGT GAACCTGATC ACCTATCAAC AAATTTATGA AGCTAATCTG AAAGTCATTT CCGCCGGGGC CGAGATTTTC GATTCGGTGC TGGAAATGTG CAGCTAA
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Protein sequence | MDMINIGYSG ASTAQVELNV TAQNTANAMT TGYTRQVAEI STIGASGGSP NSAGNGVQVD SIRRVSNQYQ VNQVWYAASD YGYYSTQQGY LTQLEAVLSD DNSSLSGGFD NFFAALNEAT TSPDDSALRE QVISEAGALS LRIDNTLDYI DSQSTEIISQ QQAMVSQINT LTSGIASYNQ QIAQAEANGD NASALYDARD QMVEELSGMM DVQVNIDDQG NYNVTLKNGQ PLVSGQQSST IALETNADGT PTMSLTFAGT TSTMTTDTGG SLGALFDYQN DVLTPLTDTI NSMALQFADA VNNQLAQGYD LNGNPGEPLF IYDASNADGP LTVNPDITAD ELAFSSSPDE SGNSDNLQAL INISTEPLEI ANLGSVTVGQ ACSSIISNIG IYSQQNQTEV DAASNVYSEA QNQQSSVSGV SMDEEAVNLI TYQQIYEANL KVISAGAEIF DSVLEMCS
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