| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0267 |
|---|
| Symbol | flgF |
|---|
| ID | 6145573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 278343 |
|---|
| End bp | 279080 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641615165 |
|---|
| Product | flagellar basal body rod protein FlgF |
|---|
| Protein accession | YP_001742374 |
|---|
| Protein GI | 170680219 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4787] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCT TGATTTATAC CGCCCTGAGC GGGGCTTCTC AGACGTTGTA TGAGCAGCAG
ATTAGCGCCA ACAACCTGGC GAACGTCAAC ACCAACGGTT TTCGCGCCGA TATGGCAATG
GCGACCAATG ACAAGGTGAA AGGCGGCGGC TTCGACACTC GCTATATGGC GCAGGAAGGG
GCCAGCGGCG TGAACGACAG CACGGGTGTG GCGGAGAAAA CCGAACGCCC GCTGGACGTG
GCGATTCAGG GCGCGGGTTA CATTGCGGTG CAGGATAAAA ACGGCAACGA AGTCTATACC
CGCAACGGCA ACATTCAGCA GGACGATCAG GGGCAACTGA CCATCGACGG CAATCTGGTG
CTGGGGGATA ACGGCCCGAT CATTCTGCCG CCGAACGCCA TTGCCTCGTT TGGCAGCGAC
GGCACGCTGT CGGTGACGCC TGATGACGGC GACGTGACCG CCACGATGGA TATCGACCGC
CTGAAGCTGG TGGATATCCC GGTCGCTAAC CTGGCGAAAA ATCCTGAAGG GATGCTGGTG
ACTAGCGACG GCATTCCGGC CCAGCGCGAT GAAAACATCA AAGTCAGCGG CGGTTTTCTC
GAAGGCAGCA ACGTCTCGGC GGTGAGCGAA ATGATGTCGT CCATCGCCAT GAACCGCCAG
TTTGAAGCGC AGATCAAGAT GATGAAAACA GCCGAAGATA TCAGCGACGC GGGCAACCGC
TTATTGCGCG GCTCGTAA
|
|---|
| Protein sequence | MDRLIYTALS GASQTLYEQQ ISANNLANVN TNGFRADMAM ATNDKVKGGG FDTRYMAQEG
ASGVNDSTGV AEKTERPLDV AIQGAGYIAV QDKNGNEVYT RNGNIQQDDQ GQLTIDGNLV
LGDNGPIILP PNAIASFGSD GTLSVTPDDG DVTATMDIDR LKLVDIPVAN LAKNPEGMLV
TSDGIPAQRD ENIKVSGGFL EGSNVSAVSE MMSSIAMNRQ FEAQIKMMKT AEDISDAGNR
LLRGS
|
|---|
| |