| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0265 |
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| Symbol | lfgD |
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| ID | 6147224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 276405 |
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| End bp | 277118 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641615163 |
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| Product | lateral flagellar rod protein LfgD |
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| Protein accession | YP_001742372 |
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| Protein GI | 170679856 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCC TGGCGCTGAA TGCGCAATCA CCGCAGCCGA CCGCCACGCC GGAAAGCAAT
AATGTGGCGG CCAGCGACAC GACAAGCAGC AGCGATAGCT CGCCCGTCGA TACCTTCCTG
ACGCTGTTTG TCGCTGAGAT CCAAAACCAG GACCCGACCG ACCCGACTGA CGCCACCGAA
TATATCGACC AGCTTTCGTC AATGGCGCAG GTGGCGATGA TGGAAGAGAT GAGCGTGCAG
GCGAATACCA ACGCGGTGTT GATGAGCAAC ATTCAGGTGA TGGCGCTCGG CAACCTGGTG
GGCGACGACA TTATGGTGCA GACCACCGCC TTGCAGGTGA GTGACCAGAC CATTAACGGT
CGCGCCACGC TTGACGACGC CTGTACCACC GCCGATCTCC ACTTTACCGA TGCCGCAGGC
GATGACTATA CGGTGTCGCT GATCCCGGAA GGGAGTTCGT CCGTCGGGCC AGGCCAGGTG
GATTTCTCGG TGAATCCCGC GGATTACGGT ATCCCGCCGG GCGATTACGA CGTCTCGGTG
GTGACCAACA CCGGGGAAGA AGAGGTGCCG ATTGAAGTCT CCGGCGAAGT GGAAGATGTG
CGCATCCCGC TCGACGGCAG CTCCCCGGTA CTTAACGTTG CCGGTGTAGG TGAAGTGCCG
TTCACCATGA TTAGCCAGTT TGGCGTACCC GATGCCGACA GTGATGTGGC GTAA
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| Protein sequence | MNTLALNAQS PQPTATPESN NVAASDTTSS SDSSPVDTFL TLFVAEIQNQ DPTDPTDATE
YIDQLSSMAQ VAMMEEMSVQ ANTNAVLMSN IQVMALGNLV GDDIMVQTTA LQVSDQTING
RATLDDACTT ADLHFTDAAG DDYTVSLIPE GSSSVGPGQV DFSVNPADYG IPPGDYDVSV
VTNTGEEEVP IEVSGEVEDV RIPLDGSSPV LNVAGVGEVP FTMISQFGVP DADSDVA
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