| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0248 |
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| Symbol | lafK |
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| ID | 6144641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 261788 |
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| End bp | 262774 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641615146 |
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| Product | lateral flagellar RpoN-interacting regulatory protein LafK |
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| Protein accession | YP_001742355 |
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| Protein GI | 170681447 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC TTATTGCAAC TGCCGCTTCC AGCATTAACG CTTTTACTCT GGCAAAGCGT
GTCGCCGCCT TTAACGTGCC GGTGCTCATT CAGGGCGAAA CCGGCGCGGG GAAAGAGTGC
GTGGCGAAAT ATATTCACAC CGTAGCCTTT GGTGAAAATG ATAATGCGCC CTATATCGGC
GTGAACTGCG CGGCGATCCC GGAAAATATG CTGGAATCGA CGTTATTTGG CTACGACAAA
GGCGCATTTA CCGGCGCAAT TGCCAGCGTG CCAGGAAAAA TGGAACTGGC AAATAACGGC
TCCTTATTGC TCGATGAAAT TGGTGAAATG CCGCTGGCGC TACAGGCCAA AATATTACGC
GTGTTGCAGG AACAACAGGT TGAGCGATTA GGCAGCAACC GACAAATCAA ACTCAATTTT
CGCCTGATTG CCTGCACCAA TAAAAACCTG GAGCAGGAAG TTGCCGCCGG ACGTTTTCGT
GAAGATCTCT ATTATCGTCT GGCGGTGATT CCTATTACCA TGCCGCCGCT GCGTGAACGT
CTGAACGATA TTATTCCGCT GGCAGAGTCA TTTATTAAAA AATACTCCAC GGTGCTGGTG
AAAAATATCA CCCTGTCCGA ATCCACCCGC CGTGCGCTGC TCAATTACCG TTGGCCCGGT
AACGTTCGCC AACTGGAAAA CGCCATTCAG CGGGGAATGA TTTTAAATCG CGACGGCGTA
ATTTACCCGG ATGCATTAGG CCTGCCGGAC ACCGATATTG CTGACCACAG TGAACTGCAA
TGGCCTGTTC AGCCCGCCGT CCACATTGCC GAAACCGGCG ATTTAGGCCA GCACGGACGA
AGCGCGCAGT ATCAATATAT CGCCGACCTG ATGCGTAAAT ATCAGGGCAA CCGCAGCAAA
ATCGCTGACC TGTTAGGCAT TACCCCGCGC GCACTGCGCT ATCGACTGGC CTCCATGCGC
AAGCACGGTA TCGAAGTTTT CTCCTGA
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| Protein sequence | MSELIATAAS SINAFTLAKR VAAFNVPVLI QGETGAGKEC VAKYIHTVAF GENDNAPYIG
VNCAAIPENM LESTLFGYDK GAFTGAIASV PGKMELANNG SLLLDEIGEM PLALQAKILR
VLQEQQVERL GSNRQIKLNF RLIACTNKNL EQEVAAGRFR EDLYYRLAVI PITMPPLRER
LNDIIPLAES FIKKYSTVLV KNITLSESTR RALLNYRWPG NVRQLENAIQ RGMILNRDGV
IYPDALGLPD TDIADHSELQ WPVQPAVHIA ETGDLGQHGR SAQYQYIADL MRKYQGNRSK
IADLLGITPR ALRYRLASMR KHGIEVFS
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