Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0234 |
Symbol | gmhA |
ID | 6145599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 250574 |
End bp | 251152 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641615133 |
Product | phosphoheptose isomerase |
Protein accession | YP_001742342 |
Protein GI | 170681190 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.407926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAGG ATCTTATTCG TAATGAACTG AACGAAGCGG CGGAAACGCT GGCTAACTTT TTAAAAGATG ACGCCAATAT TCACGCCATT CAGCGCGCGG CGGTCCTGTT AGCAGACAGC TTTAAAGCCG GTGGCAAAGT GCTTTCCTGT GGCAACGGCG GCTCCCATTG CGACGCTATG CACTTTGCCG AAGAGTTGAC CGGTCGCTAC CGTGAAAACC GTCCGGGCTA CCCGGCGATT GCCATTTCTG ACGTTAGTCA TATTTCCTGC GTCGGTAACG ATTTTGGTTT CAATGATATT TTCTCCCGTT ACGTTGAAGC GGTAGGTCGC GAAGGCGATG TACTGCTGGG GATCTCCACC TCCGGTAACT CTGCAAACGT GATCAAAGCG ATCGCGGCGG CGCGTGAGAA GGGGATGAAA GTGATCACCC TGACCGGTAA AGACGGCGGT AAAATGGCTG GCACAGCGGA TATCGAAATT CGCGTACCGC ACTTTGGTTA TGCCGACCGC ATTCAGGAGA TCCACATTAA AGTGATCCAT ATCCTGATCC AGTTAATTGA AAAAGAGATG GTTAAGTAA
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Protein sequence | MYQDLIRNEL NEAAETLANF LKDDANIHAI QRAAVLLADS FKAGGKVLSC GNGGSHCDAM HFAEELTGRY RENRPGYPAI AISDVSHISC VGNDFGFNDI FSRYVEAVGR EGDVLLGIST SGNSANVIKA IAAAREKGMK VITLTGKDGG KMAGTADIEI RVPHFGYADR IQEIHIKVIH ILIQLIEKEM VK
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