Gene EcSMS35_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0231 
Symbol 
ID6143660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp246450 
End bp247220 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content55% 
IMG OID641615130 
Producthypothetical protein 
Protein accessionYP_001742339 
Protein GI170682248 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0319803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGGTT TGAAGATTAC GCTTTTGCAG CAACCACTGG TGTGGATGGA TGGCCCTGCC 
AACCTGCGTC ATTTTGATCG TCAACTGGAA GGTATTACCG GACGCGATGT GATCGTTCTA
CCGGAGATGT TTACCAGCGG CTTTGCCATG GAAGCGGCAG CTGCGTCGCT AGCACAAGAT
GACGTAGTGA ACTGGATGAC AGCCAAAGCG CAGCAGTGCA ATGCGCTGAT TGCAGGCAGT
GTTGCATTAC AAACGGAGTC TGGTTCGGTT AACCGCTTTT TGCTGGTTGA GCCGGGCGGC
ACGGTACATT TTTATGATAA GCGTCATCTG TTCCGAATGG CAGATGAGCA TCTGCATTAT
AAAGCGGGCA ATGCGCGAGT AATTGTGGAA TGGCGCGGCT GGCGTATTTT GCCGCTGGTG
TGCTACGACT TACGTTTTCC TGTGTGGTCG CGCAATCTCA ACGATTATGA CCTCGCCCTG
TACGTCGCCA ACTGGCCTGC TCCGCGCTCT CTGCACTGGC AGGCATTGCT GACAGCCCGC
GCGATTGAGA ATCAGGCGTA TGTGGCGGGA TGCAATCGCG TCGGCAGCGA TGGCAACGGC
TGCCATTATC GCGGTGACAG CAGAGTGATT AATCCACAGG GCGAGATTAT CGCCACCGCC
GACGCGCATC AGGCAACGCG CATTGATGCG GAGCTGTCGA TGGTGGCGTT GCGGGAATAT
AGAGAAAAGT TTCCGGCATG GCGGGATGCG GATGAATTCA CATTTCGTTA G
 
Protein sequence
MPGLKITLLQ QPLVWMDGPA NLRHFDRQLE GITGRDVIVL PEMFTSGFAM EAAAASLAQD 
DVVNWMTAKA QQCNALIAGS VALQTESGSV NRFLLVEPGG TVHFYDKRHL FRMADEHLHY
KAGNARVIVE WRGWRILPLV CYDLRFPVWS RNLNDYDLAL YVANWPAPRS LHWQALLTAR
AIENQAYVAG CNRVGSDGNG CHYRGDSRVI NPQGEIIATA DAHQATRIDA ELSMVALREY
REKFPAWRDA DEFTFR