Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0231 |
Symbol | |
ID | 6143660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 246450 |
End bp | 247220 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641615130 |
Product | hypothetical protein |
Protein accession | YP_001742339 |
Protein GI | 170682248 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0319803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCTGGTT TGAAGATTAC GCTTTTGCAG CAACCACTGG TGTGGATGGA TGGCCCTGCC AACCTGCGTC ATTTTGATCG TCAACTGGAA GGTATTACCG GACGCGATGT GATCGTTCTA CCGGAGATGT TTACCAGCGG CTTTGCCATG GAAGCGGCAG CTGCGTCGCT AGCACAAGAT GACGTAGTGA ACTGGATGAC AGCCAAAGCG CAGCAGTGCA ATGCGCTGAT TGCAGGCAGT GTTGCATTAC AAACGGAGTC TGGTTCGGTT AACCGCTTTT TGCTGGTTGA GCCGGGCGGC ACGGTACATT TTTATGATAA GCGTCATCTG TTCCGAATGG CAGATGAGCA TCTGCATTAT AAAGCGGGCA ATGCGCGAGT AATTGTGGAA TGGCGCGGCT GGCGTATTTT GCCGCTGGTG TGCTACGACT TACGTTTTCC TGTGTGGTCG CGCAATCTCA ACGATTATGA CCTCGCCCTG TACGTCGCCA ACTGGCCTGC TCCGCGCTCT CTGCACTGGC AGGCATTGCT GACAGCCCGC GCGATTGAGA ATCAGGCGTA TGTGGCGGGA TGCAATCGCG TCGGCAGCGA TGGCAACGGC TGCCATTATC GCGGTGACAG CAGAGTGATT AATCCACAGG GCGAGATTAT CGCCACCGCC GACGCGCATC AGGCAACGCG CATTGATGCG GAGCTGTCGA TGGTGGCGTT GCGGGAATAT AGAGAAAAGT TTCCGGCATG GCGGGATGCG GATGAATTCA CATTTCGTTA G
|
Protein sequence | MPGLKITLLQ QPLVWMDGPA NLRHFDRQLE GITGRDVIVL PEMFTSGFAM EAAAASLAQD DVVNWMTAKA QQCNALIAGS VALQTESGSV NRFLLVEPGG TVHFYDKRHL FRMADEHLHY KAGNARVIVE WRGWRILPLV CYDLRFPVWS RNLNDYDLAL YVANWPAPRS LHWQALLTAR AIENQAYVAG CNRVGSDGNG CHYRGDSRVI NPQGEIIATA DAHQATRIDA ELSMVALREY REKFPAWRDA DEFTFR
|
| |