Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0228 |
Symbol | |
ID | 6146052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 244160 |
End bp | 244882 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641615126 |
Product | putative methyltransferase |
Protein accession | YP_001742336 |
Protein GI | 170680838 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0178403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGG CAAGAGTCCC TCAAACTGTC GTGGCTCCTG ATTGCTGGGG CGATTTGCCC TGGGGAGAGC TTTATCGCAA GGCGCTGGAG CGCCAGCTCA ACCCGTGGTT CACTAAAATG TATGGTTTTC ATCTGCTTAA GATTGGCAAT TTAAGCGCAG AAATCAATTG CGAAGCGTGC GCGGTTTCTC ATCAAGTGAA TGTTTCTGCG CAAGGAATGC CCGTCCAGGT GCAGGCGGAT CCACTTCATC TTCCTTTTGC CGATAAATCC GTTGATGTTT GTCTACTGGC ACATACCTTG CCGTGGTGCA CCGATCCGCA TCGTTTATTG CGTGAAGCCG ATCGGGTACT GATTGATGAT GGCTGGCTGG TGATTAGTGG CTTCAACCCC ATCAGTTTAA TGGGATTACG CAAACTTGTG CCGGTATTGC GCAAAACCTC GCCCTATAAT AGCCGGATGT TTACTCTGAT GCGGCAACTG GACTGGCTCT CTTTGTTGAA TTTTGAAGTG CTACACGCCA GCCGTTTCCA CGTTCTCCCG TGGAACAAAC ACGGTGGAAA ACTATTGAAT GCGCATATTC CTGCGCTTGG TTGCTTACAA CTTATTGTCG CCCGGAAACG GACTATTCCT TTAACGCTAA ATCCGATGAA ACAGAGTAAA AACAAGCCAC GAATTCGCCA GGCGGTTGGA GCCACCCGGC AATGTCGTAA ACCACAGGCT TAA
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Protein sequence | MKPARVPQTV VAPDCWGDLP WGELYRKALE RQLNPWFTKM YGFHLLKIGN LSAEINCEAC AVSHQVNVSA QGMPVQVQAD PLHLPFADKS VDVCLLAHTL PWCTDPHRLL READRVLIDD GWLVISGFNP ISLMGLRKLV PVLRKTSPYN SRMFTLMRQL DWLSLLNFEV LHASRFHVLP WNKHGGKLLN AHIPALGCLQ LIVARKRTIP LTLNPMKQSK NKPRIRQAVG ATRQCRKPQA
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