Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0225 |
Symbol | mltD |
ID | 6144705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 241941 |
End bp | 243161 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641615124 |
Product | membrane-bound lytic murein transglycosylase D |
Protein accession | YP_001742334 |
Protein GI | 170681258 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.459174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGATG GGACGTCTAT CGCGCCAGAT GGTGACTTGT GGGCTTTCAT TGGCGACGAG CTAAAGATGG GAATTCCGGA AAACGACCGG ATTCGCGAAC AGAAACAGAA ATATTTACGC AATAAGAGCT ATCTCCACGA TGTAACTTTA CGGGCAGAGC CGTATATGTA CTGGATAGCC GGGCAAGTTA AAAAACGTAA CATGCCTATG GAACTGGTAC TACTACCCAT AGTGGAGAGC GCTTTTGATC CTCACGCAAC GTCTGGCGCC AATGCCGCGG GCATCTGGCA GATCATTCCG AGCACGGGGC GCAATTATGG TTTGAAACAG ACCCGCAATT ATGACGCGCG TCGCGATGTT GTTGCTTCAA CAACTGCCGC GCTGAACATG ATGCAGCGTC TGAACAAGAT GTTTGACGGC GACTGGCTTC TGACCGTAGC GGCTTATAAC AGCGGCGAAG GTCGGGTCAT GAAGGCAATT AAAACGAACA AAGCGCGTGG GAAATCCACG GACTTCTGGT CGTTACCGTT GCCGCAGGAA ACGAAGCAGT ACGTGCCTAA AATGCTGGCA TTGAGTGATA TTCTCAAAAA CAGCAAGCGT TATGGCGTAC GTCTGCCAAC GACCGATGAA AGCCGTGCTC TGGCGCGTGT GCACCTGAGC AGCCCGGTTG AAATGGCGAA GGTTGCAGAT ATGGCGGGGA TTTCCGTCAG CAAGCTGAAG ACATTCAACG CTGGCGTGAA AGGCTCCACG CTGGGCGCAA GTGGTCCGCA GTACGTGATG GTGCCAAAGA AGCATGCAGA TCAACTGCGT GAATCTCTGG CTTCAGGCGA AATTGCTGCT GTACAGTCGA CGCTGGTTGC CGACAATACG CCGCTTAACA GCCGTGTTTA CACCGTACGC TCTGGCGACA CGCTTTCAAG TATCGCTTCA CGTCTCGGCG TAAGCACCAA AGATTTGCAG CAGTGGAACA AACTGCGCGG ATCTAAGCTG AAGCCAGGCC AAAGTTTGAC GATTGGTGCA GGCAGTAGCG CACAGCGACT GGCAAACAAC AGCGATAGCA TTACGTATCG TGTGCGCAAA GGCGATTCGC TTTCAAGCAT TGCTAAACGC CACGGCGTGA ACATCAAAGA TGTAATGCGC TGGAACAGCG ATACTGCGAA TCTGCAACCA GGCGATAAGC TGACGTTGTT TGTGAAAAAC AACAGCATGC CAGACTCCTG A
|
Protein sequence | MDDGTSIAPD GDLWAFIGDE LKMGIPENDR IREQKQKYLR NKSYLHDVTL RAEPYMYWIA GQVKKRNMPM ELVLLPIVES AFDPHATSGA NAAGIWQIIP STGRNYGLKQ TRNYDARRDV VASTTAALNM MQRLNKMFDG DWLLTVAAYN SGEGRVMKAI KTNKARGKST DFWSLPLPQE TKQYVPKMLA LSDILKNSKR YGVRLPTTDE SRALARVHLS SPVEMAKVAD MAGISVSKLK TFNAGVKGST LGASGPQYVM VPKKHADQLR ESLASGEIAA VQSTLVADNT PLNSRVYTVR SGDTLSSIAS RLGVSTKDLQ QWNKLRGSKL KPGQSLTIGA GSSAQRLANN SDSITYRVRK GDSLSSIAKR HGVNIKDVMR WNSDTANLQP GDKLTLFVKN NSMPDS
|
| |