| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0223 |
|---|
| Symbol | |
|---|
| ID | 6145432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 240248 |
|---|
| End bp | 241048 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641615122 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001742332 |
|---|
| Protein GI | 170679930 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.238641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGAAAAA ACACCTATGC CATGCGCTAT GTTGCCGGAC AACCTGCGGA AAGGATCTTA
CCGCCGGGGT CTTTTGCGAG CATCGGCCAG GCATTACCAC CTGGAGAACC GTTAAGTACC
GAAGAGCGTA TTCGGATCCT GGTGTGGAAC ATATACAAAC AGCAACGCGC TGAATGGTTG
TCGGTATTAA AGAACTACGG CAAAGATGCA CATCTGGTGT TATTGCAGGA AGCGCAGACA
ACGCCAGAGT TAGTACAGTT TGCGACTGCT AACTATCTTG CCGCCGATCA GGTACCCGCT
TTCGTGCTGC CACAACATCC TTCTGGCGTA ATGACCCTTT CGGCGGCACA TCCAGTGTAT
TGCTGCCCGT TACGTGAACG AGAACCCATT TTGCGTCTGG CGAAGTCGGC ACTGGTGACG
GTCTATCCAT TGCCTGACAC CCGCCTGTTG ATGGTGGTTA ATATACACGC CGTCAATTTC
AGTTTGGGCG TGGATGTCTA TAGTAAGCAG TTACTTCCTA TTGGCGATCA GATAGCTCAC
CACAGCGGCC CGGTCATTAT GGCGGGAGAT TTCAATGCCT GGAGCCGTAG AAGGATGAAC
GCGTTATATC GCTTTGCGCG GGAAATGTCG CTGCGCCAGG TGCGTTTTAC CGATGATCAG
CGCCGTCGGG CGTTTGGTCG CCCGCTCGAT TTTGTTTTCT ACCGTGGTCT GAACGTCAGC
GAAGCTTCTG TACTGGTTAC GCGCGCTTCC GATCACAATC CGCTACTCGT TGAATTCAGT
CCCGGCAAGC CTGATAAATA A
|
|---|
| Protein sequence | MRKNTYAMRY VAGQPAERIL PPGSFASIGQ ALPPGEPLST EERIRILVWN IYKQQRAEWL
SVLKNYGKDA HLVLLQEAQT TPELVQFATA NYLAADQVPA FVLPQHPSGV MTLSAAHPVY
CCPLREREPI LRLAKSALVT VYPLPDTRLL MVVNIHAVNF SLGVDVYSKQ LLPIGDQIAH
HSGPVIMAGD FNAWSRRRMN ALYRFAREMS LRQVRFTDDQ RRRAFGRPLD FVFYRGLNVS
EASVLVTRAS DHNPLLVEFS PGKPDK
|
|---|
| |