Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0222 |
Symbol | dkgB |
ID | 6143645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 238293 |
End bp | 239096 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641615120 |
Product | 2,5-diketo-D-gluconate reductase B |
Protein accession | YP_001742330 |
Protein GI | 170681897 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0705129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCC CTGCATTTGG TTTAGGTACT TTCCGTCTGA AAGACGACGT TGTTATTTCA TCTGTGAAAA CGGCGCTTGA ACTTGGTTAT CGCGCAATTG ATACCGCACA AATCTATGAT AACGAAGCCG CAGTAGGTCA GGCGATTGCA GAAAGTGGCG TGCCACGTAA TGAACTCTAC ATCACCACTA AAATCTGGAT TGAAAATCTC AGCAAAGACA AATTGACCCC AAGTCTGAAA GAGAGCCTGC AAAAATTGCG TATCGATTAT GTTGATCTGA CGCTAATCCA CTGGCCGTCA CCAAACGATG AAGTCTCTGT TGAAGAGTTT ATGCAGGCGC TGCTGGAAGC CAAAAAACAA GGGCTGACGC GTGAGATCGG TATTTCCAAC TTCACGATCC CATTGATGGA AAAGGCGATT GCTGCTGTTG GCGCTGAAAA CATCGCTACT AACCAGATTG AACTCTCACC TTATCTGCAA AACCGTAAAG TGGTCGCCTG GGCTAAACAG CACGGCATCC ATATTACTTC CTATATGACG CTGGCGTATG GTAAGGCCCT GAAAGATGAG GTTATTGCTC GTATCGCAGC TAAACACAAT GCGACTCCGG CACAAGTGAT TCTGGCGTGG GCTATGGGGG AAGGTTACTC CGTAATTCCT TCTTCTACTA AACGTAAAAA CCTGGAAAGT AATCTTAAGG CACAAAATTT ACAGCTTGAT GCCGAAGATA AAAAAGCGAT CGCCGCACTG GATTGCAACG ACCGCCTGGT TAGCCCGGAA GGTCTGGCTC CTGAATGGGA TTAA
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Protein sequence | MAIPAFGLGT FRLKDDVVIS SVKTALELGY RAIDTAQIYD NEAAVGQAIA ESGVPRNELY ITTKIWIENL SKDKLTPSLK ESLQKLRIDY VDLTLIHWPS PNDEVSVEEF MQALLEAKKQ GLTREIGISN FTIPLMEKAI AAVGAENIAT NQIELSPYLQ NRKVVAWAKQ HGIHITSYMT LAYGKALKDE VIARIAAKHN ATPAQVILAW AMGEGYSVIP SSTKRKNLES NLKAQNLQLD AEDKKAIAAL DCNDRLVSPE GLAPEWD
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