Gene EcSMS35_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0208 
SymbolrcsF 
ID6143243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp228727 
End bp229080 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content55% 
IMG OID641615109 
Productouter membrane lipoprotein 
Protein accessionYP_001742325 
Protein GI170682244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.526616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGCA GATCCCCTGT CGAACCCGTT CAAAGCACTG CACCCCAGCC GAAAGCGGAG 
CCTGCAAAAC CGAAAGCGCC GCGCGCCACG CCGGTCCGAA TTTATACCAA TGCAGAAGAA
TTAGTCGGCA AACCGTTCCG CGATCTCGGT GAAGTCAGTG GCGACTCTTG CCAGGCCTCT
AATCAGGACT CTCCGCCGAG CATTCCAACC GCACGTAAGC GGATGCAAAT CAACGCCTCG
AAAATGAAAG CCAATGCGGT ATTACTGCAT AGCTGCGAAG TCACCAGCGG TACGCCAGGC
TGCTATCGTC AGGCTGTATG TATCGGTTCT GCGCTTAACA TCACGGCGAA ATGA
 
Protein sequence
MLSRSPVEPV QSTAPQPKAE PAKPKAPRAT PVRIYTNAEE LVGKPFRDLG EVSGDSCQAS 
NQDSPPSIPT ARKRMQINAS KMKANAVLLH SCEVTSGTPG CYRQAVCIGS ALNITAK