Gene EcSMS35_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0207 
Symbol 
ID6144747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp228023 
End bp228730 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content54% 
IMG OID641615108 
Producthypothetical protein 
Protein accessionYP_001742324 
Protein GI170683947 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.9755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTT TCCAGTTCGA GCAAATAGGC GTTATTCGCT CGCCCTATAA AGAAAAATTC 
GCCGTTCCGC GCCAGCCAGG TCTGGTAAAA AGCGCCAACG GCGAACTGCA TCTCATTGCT
CCCTACAACC AGGCCGACGC CGTTCGCGGC CTGGAAGCGT TCAGCCATTT ATGGATCCTT
TTCGTCTTTC ATCAAACGAT GGAAGGCGGC TGGCGTCCAA CTGTGCGTCC GCCTCGTCTT
GGCGGTAATA CCAGAATGGG TGTTTTCGCT ACGCGCTCCA CTTTCCGCCC TAACCCGATT
GGTATGTCGC TGGTAGAGCT GAAAGAGGTT GTTTGCCATA AAGATAGCGT GATTCTGAAG
CTCGGCAGTC TGGATCTCGT CGATGGTACG CCGGTAGTGG ATATCAAACC GTATCTCCCC
TTTGCTGAAT CGCTTCCCGA TGCCAGTGCC AGCTATGCGC AAAGTGCGCC AGCGGCAGAA
ATGGCGGTGA GTTTTACCGC AGAGGTCGAA AAGCAGCTTT TGACGCTGGA GAAGCGTTAT
CCGCAGTTAA CGCTGTTTAT CCGCGAAGTA CTGGCGCAGG ACCCGCGCCC GGCCTATCGT
AAAGGTGAGG AAACGGGCAA AACCTATGCC GTCTGGCTGC ATGATTTTAA CGTTCGCTGG
CGCGTCACCG ACGCAGGTTT TGAAGTCTTT GCGCTGGAAC CGCGTTAA
 
Protein sequence
MSSFQFEQIG VIRSPYKEKF AVPRQPGLVK SANGELHLIA PYNQADAVRG LEAFSHLWIL 
FVFHQTMEGG WRPTVRPPRL GGNTRMGVFA TRSTFRPNPI GMSLVELKEV VCHKDSVILK
LGSLDLVDGT PVVDIKPYLP FAESLPDASA SYAQSAPAAE MAVSFTAEVE KQLLTLEKRY
PQLTLFIREV LAQDPRPAYR KGEETGKTYA VWLHDFNVRW RVTDAGFEVF ALEPR