| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0193 |
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| Symbol | lpxB |
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| ID | 6144108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 212530 |
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| End bp | 213678 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615094 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001742310 |
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| Protein GI | 170681777 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000445848 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC AGCGTCCATT AACGATTGCC CTGGTCGCCG GAGAAACCTC CGGCGATATC
CTGGGGGCCG GTTTAATCCG TGCTCTGAAA GAACGTGTGC CCAATGCCCG CTTTGTTGGT
GTTGCCGGGC CACGAATGCA AGCCGAAGGC TGCGAAGCCT GGTACGAAAT GGAAGAGCTG
GCGGTGATGG GCATTGTTGA AGTGCTCGGG CGTCTGCGTC GCTTACTGCA TATTCGTGCC
GATCTGACAA AGCGTTTTGG CGAACTGAAG CCAGATGTTT TTGTCGGTAT TGATGCGCCA
GACTTCAATA TTACTCTTGA AGGTAACCTC AAAAAGCAGG GTGTCAAAAC CATTCATTAC
GTTAGTCCGT CCGTCTGGGC GTGGCGACAG AAACGCGTTT TCAAAATAGG CAGAGCCACC
GATCTGGTGC TCGCATTTCT GCCTTTCGAA AAGGCGTTTT ATGACAAATA CAACGTACCG
TGCCGCTTTA TCGGTCATAC CATGGCTGAT GCCATGCCAT TAGATCCAGA TAAAAATGGT
GCCCGTGATG TGCTGGGTAT CCCTTACGAT GCCCACTGTC TGGCATTGTT GCCGGGCAGC
CGTGGTGCAG AAGTCGAAAT GCTTAGTGCC GATTTCCTGA AAACGGCCCA GCTTTTGCGT
CAGACATATC CCGATCTCGA GATCGTGGTG CCGCTGGTGA ATGCCAAACG CCGCGAGCAG
TTTGAGCGTA TCAAAGCTGA AGTCGCACCG GACCTTGCTG TTCATCTGCT GGATGGAATG
GGCCGTGAGG CGATGGTCGC CAGTGATGCG GCGCTACTGG CGTCGGGTAC GGCAGCCCTG
GAGTGCATGC TGGCGAAATG CCCGATGGTG GTGGGATATC GCATGAAGCC TTTTACCTTC
TGGCTGGCGA AGCGGCTGGT GAAAACCGAG TATGTCTCGC TGCCAAATTT GCTGGCGGGC
AGAGAGTTAG TCAAAGAGTT ATTGCAGGAA GAGTGTGAGC CGCAAAAACT GGCTGCGGCG
CTGTTACCGC TGTTGGCGAA CGGGAAAACC AGTCACGCGA TGCACGATAC CTTCCGTGAA
CTGCATCAGC AGATCCGCTG CAATGCCGAT GAGCAGGCGG CACAAGCCGT TCTGGAGTTA
GCACAATGA
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| Protein sequence | MTEQRPLTIA LVAGETSGDI LGAGLIRALK ERVPNARFVG VAGPRMQAEG CEAWYEMEEL
AVMGIVEVLG RLRRLLHIRA DLTKRFGELK PDVFVGIDAP DFNITLEGNL KKQGVKTIHY
VSPSVWAWRQ KRVFKIGRAT DLVLAFLPFE KAFYDKYNVP CRFIGHTMAD AMPLDPDKNG
ARDVLGIPYD AHCLALLPGS RGAEVEMLSA DFLKTAQLLR QTYPDLEIVV PLVNAKRREQ
FERIKAEVAP DLAVHLLDGM GREAMVASDA ALLASGTAAL ECMLAKCPMV VGYRMKPFTF
WLAKRLVKTE YVSLPNLLAG RELVKELLQE ECEPQKLAAA LLPLLANGKT SHAMHDTFRE
LHQQIRCNAD EQAAQAVLEL AQ
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