Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0186 |
Symbol | cdsA |
ID | 6145438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 204859 |
End bp | 205716 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641615087 |
Product | CDP-diglyceride synthase |
Protein accession | YP_001742303 |
Protein GI | 170682588 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00459839 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGAAGT ATCGCCTGAT ATCTGCTTTT GTGTTAATAC CCGTCGTCAT CGCGGCGTTG TTTCTGTTGC CGCCGGTGGG GTTCGCCATT GTAACGCTGG TGGTCTGTAT GCTGGCAGCG TGGGAATGGG GACAGCTTAG CGGTTTTACC ACTCGTTCGC AGCGAGTATG GTTGGCGGTG TTATGCGGGT TATTGTTGGC GCTGATGCTT TTTCTGTTGC CGGAATATCA CCGAAATATT CATCAACCGC TGGTTGAAAT CTCACTTTGG GCTTCGCTGG GTTGGTGGAT TGTCGCGCTA TTGCTGGTGC TGTTTTACCC AGGTTCCGCA GCAATCTGGC GTAACTCTAA AACATTGCGC ATTATTTTTG GCGTGCTAAC CATTGTTCCC TTCTTCTGGG GCATGCTGGC GTTACGGGCC TGGCACTACG ACGAGAATCA TTACAGTGGC GCAATATGGC TGCTCTATGT CATGATCCTG GTATGGGGCG CTGACTCTGG CGCATATATG TTTGGCAAAT TGTTTGGTAA ACATAAACTG GCACCGAAGG TTTCTCCGGG TAAAACCTGG CAAGGCTTTA TCGGTGGACT CGCGACCGCA GCGGTAATCT CATGGGGTTA TGGCATGTGG GTGAATCTCG ACGTCGCTCC CGTCACCTTA CTCATTTGCT CTATTGTCGC AGCGTTAGCC TCAGTGCTCG GCGATCTGAC CGAAAGTATG TTTAAGCGTG AAGCAGGAAT TAAGGACAGC GGTCATTTAA TTCCAGGACA CGGTGGTATT TTAGATCGTA TTGATAGCCT GACGGCTGCG GTACCGGTCT TTGCTTGCTT GTTGTTACTG GTATTCAGGA CGCTTTAA
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Protein sequence | MLKYRLISAF VLIPVVIAAL FLLPPVGFAI VTLVVCMLAA WEWGQLSGFT TRSQRVWLAV LCGLLLALML FLLPEYHRNI HQPLVEISLW ASLGWWIVAL LLVLFYPGSA AIWRNSKTLR IIFGVLTIVP FFWGMLALRA WHYDENHYSG AIWLLYVMIL VWGADSGAYM FGKLFGKHKL APKVSPGKTW QGFIGGLATA AVISWGYGMW VNLDVAPVTL LICSIVAALA SVLGDLTESM FKREAGIKDS GHLIPGHGGI LDRIDSLTAA VPVFACLLLL VFRTL
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